RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 RWDD4Q6NW29 188 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 SULF1Q8IWU6 871 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 ING2Q9H160 280 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 SLC12A6Q9UHW9 1150 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 STAP1Q9ULZ2 295 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 PSTPIP1O43586 416 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 SGPL1O95470 568 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 KLRK1P26718 216 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 ACTR2P61160 394 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 RCN1Q15293 331 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 CDC42EP5Q6NZY7 148 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 PDP2Q9P2J9 529 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 hCG_2014768A0A024R1R8 64 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 CST8O60676 142 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 SESN2P58004 480 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 GRM1Q13255 1194 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 COL9A3Q14050 684 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 ITPRIPL1Q6GPH6 555 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 EIF1ADQ8N9N8 165 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 ZNF507Q8TCN5 953 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 E2F7Q96AV8 911 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 JPH1Q9HDC5 661 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 WARS2Q9UGM6 360 aaKnown RBP12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 AGLP35573 1532 aa12.84□□□□□ -0.35
NPC1L1-204ENST00000546276 TRAPPC3O43617 180 aa12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 FDX1P10109 184 aa12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 TMEM259Q4ZIN3 620 aa12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 TTC39BQ5VTQ0 682 aaPredicted RBP12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 TTC8Q8TAM2 541 aa12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 TEKT4Q8WW24 435 aa12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 SPC25Q9HBM1 224 aa12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 PAK5Q9P286 719 aa12.83□□□□□ -0.35
NPC1L1-204ENST00000546276 ZBBXA8MT70 800 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 CPA2P48052 419 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 POU5F1BQ06416 359 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 C11orf63Q6NUN7 778 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 CATSPER4Q7RTX7 472 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 YTHDF3Q7Z739 585 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 PRPF39Q86UA1 669 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 GFM2Q969S9 779 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 MAGEA13PA6NCF6 341 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 SLC4A1P02730 911 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 OVGP1Q12889 678 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 XKR3Q5GH77 459 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 MTHFD1LQ6UB35 978 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 ZNF662Q6ZS27 426 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 CD302Q8IX05 232 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 SKA2Q8WVK7 121 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 CMTM5Q96DZ9 223 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 MXRA8Q9BRK3 442 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 FSD1LQ9BXM9 530 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 HEY2Q9UBP5 337 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 ATP8B3O60423 1300 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 DNAJC6O75061 913 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 RBP3P10745 1247 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 CYTH1Q15438 398 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 WDR72Q3MJ13 1102 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 EFHC2Q5JST6 749 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 CIAPIN1Q6FI81 312 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 SPATA18Q8TC71 538 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 TOPORSQ9NS56 1045 aaPredicted RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 HOXC10Q9NYD6 342 aa12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-204ENST00000546276 RIPK2O43353 540 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 DNAAF5Q86Y56 855 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 NAF1Q96HR8 494 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 PNMA5Q96PV4 448 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 KIFC3Q9BVG8 833 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 DCLRE1BQ9H816 532 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 SIK3Q9Y2K2 1263 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 MTM1Q13496 603 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 SGSM1Q2NKQ1 1148 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 EAPPQ56P03 285 aaPredicted RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 PLA2G4FQ68DD2 849 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 RNF139Q8WU17 664 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■■■□ 20.9
NPC1L1-204ENST00000546276 ATXN7L3BQ96GX2 97 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 AMPD2Q01433 879 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 TBCCQ15814 346 aa12.82□□□□□ -0.36
NPC1L1-204ENST00000546276 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms