RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CADM1Q9BY67 442 aaKnown RBP15.03■□□□□ -0
SRP54-202ENST00000546080 OSBPL8Q9BZF1 889 aa15.03■□□□□ -0
SRP54-202ENST00000546080 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.03■□□□□ -0
SRP54-202ENST00000546080 WDR35Q9P2L0 1181 aa15.03■□□□□ -0
SRP54-202ENST00000546080 ANKFY1Q9P2R3 1169 aa15.03■□□□□ -0
SRP54-202ENST00000546080 SIGLEC16A6NMB1 481 aa15.02■□□□□ -0
SRP54-202ENST00000546080 RIMBP2O15034 1052 aa15.02■□□□□ -0
SRP54-202ENST00000546080 PSTPIP1O43586 416 aa15.02■□□□□ -0
SRP54-202ENST00000546080 TYROBPO43914 113 aa15.02■□□□□ -0
SRP54-202ENST00000546080 GRIN3BO60391 1043 aa15.02■□□□□ -0
SRP54-202ENST00000546080 ATP9AO75110 1047 aa15.02■□□□□ -0
SRP54-202ENST00000546080 FDX1P10109 184 aa15.02■□□□□ -0
SRP54-202ENST00000546080 GJC1P36383 396 aa15.02■□□□□ -0
SRP54-202ENST00000546080 PTP4A2Q12974 167 aa15.02■□□□□ -0
SRP54-202ENST00000546080 FASTKD3Q14CZ7 662 aaKnown RBP15.02■□□□□ -0
SRP54-202ENST00000546080 HP1BP3Q5SSJ5 553 aaPredicted RBP15.02■□□□□ -0
SRP54-202ENST00000546080 DAB2IPQ5VWQ8 1189 aa15.02■□□□□ -0
SRP54-202ENST00000546080 DSTYKQ6XUX3 929 aa15.02■□□□□ -0
SRP54-202ENST00000546080 ZC3H18Q86VM9 953 aaKnown RBP15.02■□□□□ -0
SRP54-202ENST00000546080 ZFPM1Q8IX07 1006 aa15.02■□□□□ -0
SRP54-202ENST00000546080 CERS5Q8N5B7 392 aa15.02■□□□□ -0
SRP54-202ENST00000546080 SCG3Q8WXD2 468 aaKnown RBP15.02■□□□□ -0
SRP54-202ENST00000546080 TRIM11Q96F44 468 aa15.02■□□□□ -0
SRP54-202ENST00000546080 GMCL1Q96IK5 515 aa15.02■□□□□ -0
SRP54-202ENST00000546080 TUBB6Q9BUF5 446 aa15.02■□□□□ -0
SRP54-202ENST00000546080 TEKT3Q9BXF9 490 aa15.02■□□□□ -0
SRP54-202ENST00000546080 PSMC3IPQ9P2W1 217 aaPredicted RBP15.02■□□□□ -0
SRP54-202ENST00000546080 DCTN4Q9UJW0 460 aa15.02■□□□□ -0
SRP54-202ENST00000546080 A0A1W2PPM1 405 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 KRT36O76013 467 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 HAUS5O94927 633 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 FGFR1P11362 822 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 OCRLQ01968 901 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 PPP1R15BQ5SWA1 713 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 OR52E8Q6IFG1 317 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 LRRC74BQ6ZQY2 392 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 SIAH1Q8IUQ4 282 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 RHOT1Q8IXI2 618 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 GMCL1P1Q8NEA9 526 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 CCDC127Q96BQ5 260 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 TRIM4Q9C037 500 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 PPCSQ9HAB8 311 aa15.02□□□□□ -0.01
SRP54-202ENST00000546080 ZNFX1Q9P2E3 1918 aaKnown RBP15.01□□□□□ -0.01
SRP54-202ENST00000546080 CAPN9O14815 690 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 PROSCO94903 275 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 CALCAP01258 141 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 GSTA2P09210 222 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 UNGP13051 313 aaPredicted RBP15.01□□□□□ -0.01
SRP54-202ENST00000546080 HSPA1LP34931 641 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 SSR1P43307 286 aaKnown RBP15.01□□□□□ -0.01
SRP54-202ENST00000546080 GPC3P51654 580 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 SLC34A1Q06495 639 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 TRAF1Q13077 416 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 KPNB1Q14974 876 aaKnown RBP15.01□□□□□ -0.01
SRP54-202ENST00000546080 MAPK6Q16659 721 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 PRR5LQ6MZQ0 368 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 PPFIBP2Q8ND30 876 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 CPA5Q8WXQ8 436 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 STMN2Q93045 179 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 MCUR1Q96AQ8 359 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 TRAPPC9Q96Q05 1148 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 MAK16Q9BXY0 300 aaKnown RBP15.01□□□□□ -0.01
SRP54-202ENST00000546080 ADAM33Q9BZ11 813 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 PPP1R12CQ9BZL4 782 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 TMEM8AQ9HCN3 771 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 SLC24A2Q9UI40 661 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 WDR91A4D1P6 747 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 CFAP69A5D8W1 941 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 GYG2O15488 501 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 ARP10275 920 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 KRT4P19013 534 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 CD58P19256 250 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 KCNA3P22001 575 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 CETN2P41208 172 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 TCP10Q12799 353 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 SNRNP35Q16560 246 aaKnown RBP15.01□□□□□ -0.01
SRP54-202ENST00000546080 CEP55Q53EZ4 464 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 PLEKHG4Q58EX7 1191 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 ACSBG2Q5FVE4 666 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 LLGL2Q6P1M3 1020 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 MTHFD1LQ6UB35 978 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 TMEM179Q6ZVK1 233 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 CBWD2Q8IUF1 395 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 ZBED8Q8IZ13 594 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 RFWD2Q8NHY2 731 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.01□□□□□ -0.01
SRP54-202ENST00000546080 NRG4Q8WWG1 115 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 NUMBLQ9Y6R0 609 aa15.01□□□□□ -0.01
SRP54-202ENST00000546080 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
SRP54-202ENST00000546080 DDX39AO00148 427 aaKnown RBP15□□□□□ -0.01
SRP54-202ENST00000546080 ATP2A1O14983 1001 aa15□□□□□ -0.01
SRP54-202ENST00000546080 GSC2O15499 205 aa15□□□□□ -0.01
SRP54-202ENST00000546080 RTN3O95197 1032 aaPredicted RBP15□□□□□ -0.01
SRP54-202ENST00000546080 PSMG1O95456 288 aa15□□□□□ -0.01
SRP54-202ENST00000546080 ARSEP51690 589 aa15□□□□□ -0.01
SRP54-202ENST00000546080 RPS6KA3P51812 740 aa15□□□□□ -0.01
SRP54-202ENST00000546080 OVGP1Q12889 678 aa15□□□□□ -0.01
SRP54-202ENST00000546080 HAUS6Q7Z4H7 955 aa15□□□□□ -0.01
SRP54-202ENST00000546080 KATNAL2Q8IYT4 538 aa15□□□□□ -0.01
SRP54-202ENST00000546080 VPS52Q8N1B4 723 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms