RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 HERC5Q9UII4 1024 aaKnown RBP6.9□□□□□ -1.3
SNHG1-225ENST00000545920 CEP83Q9Y592 693 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 ADGRA3Q8IWK6 1321 aa6.9□□□□□ -1.3
SNHG1-225ENST00000545920 LTBP1Q14766 1721 aa6.9□□□□□ -1.31
SNHG1-225ENST00000545920 PHF20L1A8MW92 1017 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 FOXN3O00409 490 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 MEIS1O00470 390 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 CLIC2O15247 247 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 PSTPIP1O43586 416 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 SPOPO43791 374 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 DKC1O60832 514 aaKnown RBP eCLIP6.89□□□□□ -1.311e-323■□□□□ 8.7
SNHG1-225ENST00000545920 TTC4O95801 387 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 NDUFB10O96000 172 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 LMNAP02545 664 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ADH1AP07327 375 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 VIMP08670 466 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 VIL1P09327 827 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 PLS3P13797 630 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 CCNB1P14635 433 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 NQO1P15559 274 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 NPR1P16066 1061 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 TSHRP16473 764 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 SLC16A2P36021 539 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 RPL21P46778 160 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 MXI1P50539 228 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ATP11AP98196 1134 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 GTF2BQ00403 316 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 CDR2Q01850 454 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 GCNT1Q02742 428 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 MAP2K1Q02750 393 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 BNIP1Q12981 228 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 CLN3Q13286 438 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 PICALMQ13492 652 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 SUZ12Q15022 739 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 PPP1R7Q15435 360 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ABCB5Q2M3G0 1257 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 PARP6Q2NL67 630 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ZC3H12AQ5D1E8 599 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 STRIP1Q5VSL9 837 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 HIBCHQ6NVY1 386 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 XRRA1Q6P2D8 792 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 TLDC1Q6P9B6 456 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 DRICH1Q6PGQ1 229 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 LRRC34Q8IZ02 419 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 AGGF1Q8N302 714 aaeCLIP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 TEX9Q8N6V9 391 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ZNF564Q8TBZ8 553 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ZDHHC1Q8WTX9 485 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 DYDC1Q8WWB3 177 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 SREK1Q8WXA9 508 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ALG3Q92685 438 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 CNKSR1Q969H4 720 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 ARHGEF26Q96DR7 871 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 MAGEB18Q96M61 343 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 TMEM237Q96Q45 408 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 SELENOSQ9BQE4 189 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 FRMD8P1Q9BZ68 369 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 RABEP2Q9H5N1 569 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 AZI2Q9H6S1 392 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 NOD2Q9HC29 1040 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 KIAA1586Q9HCI6 787 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 TMEM8AQ9HCN3 771 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 KLHL14Q9P2G3 628 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 SMG5Q9UPR3 1016 aaKnown RBP6.89□□□□□ -1.31
SNHG1-225ENST00000545920 SNX24Q9Y343 169 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
SNHG1-225ENST00000545920 LOXHD1Q8IVV2 1947 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 LY75O60449 1722 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 EMSYQ7Z589 1322 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 SERTM1A2A2V5 107 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 RSPH10B2B2RC85 870 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 OPLAHO14841 1288 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 DCTN3O75935 186 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 RSPH10BP0C881 870 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 GYS1P13807 737 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ABCB4P21439 1286 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 COMTP21964 271 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 MZF1P28698 734 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 NMT1P30419 496 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ALDH3A1P30838 453 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 CRKP46108 304 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 CYP2J2P51589 502 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 STAT2P52630 851 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 RTP1P59025 263 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 DAB2P98082 770 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 IL9RQ01113 521 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 RRP1BQ14684 758 aaKnown RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 SETDB1Q15047 1291 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 TLR1Q15399 786 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 SIX1Q15475 284 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 ZKSCAN8Q15776 578 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-225ENST00000545920 CCNG2Q16589 344 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 CBWD6Q4V339 395 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 SGO2Q562F6 1265 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 CBWD3Q5JTY5 395 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 CBWD5Q5RIA9 395 aa6.88□□□□□ -1.31
SNHG1-225ENST00000545920 KRT39Q6A163 491 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms