RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 TM4SF5O14894 197 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 CHADO15335 359 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 PFKFB2O60825 505 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
TMEM258-208ENST00000545210 CPB1P15086 417 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 MCM7P33993 719 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 LIMK1P53667 647 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 SHC2P98077 582 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 FCHO2Q0JRZ9 810 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 PON2Q15165 354 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 ZNF568Q3ZCX4 644 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 DGKKQ5KSL6 1271 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 STXBP5Q5T5C0 1151 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 C1orf228Q6PIY5 440 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 C12orf50Q8NA57 414 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-208ENST00000545210 E2F7Q96AV8 911 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 MSANTD3Q96H12 275 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 ZFYVE19Q96K21 471 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 IFT74Q96LB3 600 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 POLR3CQ9BUI4 534 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-208ENST00000545210 GPR88Q9GZN0 384 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 CDT1Q9H211 546 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 C8orf33Q9H7E9 229 aaPredicted RBP12.59□□□□□ -0.39
TMEM258-208ENST00000545210 GTSE1Q9NYZ3 720 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
TMEM258-208ENST00000545210 TNFSF13BQ9Y275 285 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 KIAA1549LQ6ZVL6 1849 aa12.59□□□□□ -0.39
TMEM258-208ENST00000545210 TSC2P49815 1807 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-208ENST00000545210 ZNF806P0C7X5 589 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 RPA1P27694 616 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 CTHP32929 405 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 RPL9P32969 192 aaKnown RBP12.58□□□□□ -0.4
TMEM258-208ENST00000545210 MCM4P33991 863 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 PXNP49023 591 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-208ENST00000545210 FOSBP53539 338 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 ZNF280DQ6N043 979 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 WDR5BQ86VZ2 330 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 RALGPS2Q86X27 583 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-208ENST00000545210 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 DDX12PQ92771 950 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 TBC1D32Q96NH3 1257 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 LRRC3BQ96PB8 259 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 ACO2Q99798 780 aaKnown RBP12.58□□□□□ -0.4
TMEM258-208ENST00000545210 LRRC3Q9BY71 257 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
TMEM258-208ENST00000545210 MAFFQ9ULX9 164 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 YIPF1Q9Y548 306 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 TCHHQ07283 1943 aa12.58□□□□□ -0.4
TMEM258-208ENST00000545210 CCDC169A6NNP5 214 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 MEFVO15553 781 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-208ENST00000545210 EXTL3O43909 919 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 KCNE1P15382 129 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 HOXA6P31267 233 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 CCINQ13939 588 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 STPG1Q5TH74 334 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 KBTBD6Q86V97 674 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 TMC8Q8IU68 726 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 ARID3BQ8IVW6 561 aaPredicted RBP12.57□□□□□ -0.4
TMEM258-208ENST00000545210 DIS3L2Q8IYB7 885 aaKnown RBP12.57□□□□□ -0.4
TMEM258-208ENST00000545210 APPL2Q8NEU8 664 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 ERMNQ8TAM6 284 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 KIFAP3Q92845 792 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 ACAP3Q96P50 834 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 PGLYRP2Q96PD5 576 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 BHMT2Q9H2M3 363 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 SMOC1Q9H4F8 434 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 PTPRHQ9HD43 1115 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 CNTN3Q9P232 1028 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 PHLPP2Q6ZVD8 1323 aa12.57□□□□□ -0.4
TMEM258-208ENST00000545210 FAM208BQ5VWN6 2430 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 AKAP13Q12802 2813 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 EPB41L2O43491 1005 aaKnown RBP12.56□□□□□ -0.4
TMEM258-208ENST00000545210 RPP40O75818 363 aaKnown RBP12.56□□□□□ -0.4
TMEM258-208ENST00000545210 VNN2O95498 520 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 OR4Q2P0C623 313 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 RAP1GAPP47736 663 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 EPHB3P54753 998 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 TNK2Q07912 1038 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 PKN3Q6P5Z2 889 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 CACNA2D4Q7Z3S7 1137 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 TMEM130Q8N3G9 435 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 NECAB1Q8N987 351 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 GAB3Q8WWW8 586 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 LOXL4Q96JB6 756 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 TCHPQ9BT92 498 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 TARS2Q9BW92 718 aaKnown RBP12.56□□□□□ -0.4
TMEM258-208ENST00000545210 MRPL4Q9BYD3 311 aaKnown RBP12.56□□□□□ -0.4
TMEM258-208ENST00000545210 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 CRISPLD1Q9H336 500 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
TMEM258-208ENST00000545210 TIMM13Q9Y5L4 95 aaPredicted RBP12.56□□□□□ -0.4
TMEM258-208ENST00000545210 DPYSL4O14531 572 aa12.55□□□□□ -0.4
TMEM258-208ENST00000545210 EPN2O95208 641 aa12.55□□□□□ -0.4
TMEM258-208ENST00000545210 KCNK5O95279 499 aa12.55□□□□□ -0.4
TMEM258-208ENST00000545210 CCDC192P0DO97 292 aa12.55□□□□□ -0.4
TMEM258-208ENST00000545210 MCF2P10911 925 aa12.55□□□□□ -0.4
TMEM258-208ENST00000545210 HARSP12081 509 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms