RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TDRD5Q8NAT2 981 aaKnown RBP17.01■□□□□ 0.31
CCDC78-216ENST00000544996 ZSWIM2Q8NEG5 633 aa17.01■□□□□ 0.31
CCDC78-216ENST00000544996 ZNF461Q8TAF7 563 aa17.01■□□□□ 0.31
CCDC78-216ENST00000544996 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
CCDC78-216ENST00000544996 KHSRPQ92945 711 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCDC78-216ENST00000544996 PRKD2Q9BZL6 878 aa17.01■□□□□ 0.31
CCDC78-216ENST00000544996 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
CCDC78-216ENST00000544996 FBXL5Q9UKA1 691 aa17.01■□□□□ 0.31
CCDC78-216ENST00000544996 CIZ1Q9ULV3 898 aaPredicted RBP17.01■□□□□ 0.31
CCDC78-216ENST00000544996 OAZ2O95190 189 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 ODC1P11926 461 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 HOXA9P31269 272 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 ELF1P32519 619 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 ROR1Q01973 937 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 TPGS2Q68CL5 300 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 EFCAB13Q8IY85 973 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 PLCD3Q8N3E9 789 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 SLC7A14Q8TBB6 771 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 ZNF707Q96C28 371 aaPredicted RBP17■□□□□ 0.31
CCDC78-216ENST00000544996 ACSF2Q96CM8 615 aaPredicted RBP17■□□□□ 0.31
CCDC78-216ENST00000544996 SENP8Q96LD8 212 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 WDR6Q9NNW5 1121 aaKnown RBP17■□□□□ 0.31
CCDC78-216ENST00000544996 MUTYHQ9UIF7 546 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 R3HCC1Q9Y3T6 440 aaKnown RBP17■□□□□ 0.31
CCDC78-216ENST00000544996 TIMM13Q9Y5L4 95 aaPredicted RBP17■□□□□ 0.31
CCDC78-216ENST00000544996 TRIP11Q15643 1979 aa17■□□□□ 0.31
CCDC78-216ENST00000544996 MUC3AQ02505 3323 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 C2CD4DB7Z1M9 353 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 PPEF2O14830 753 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 TBC1D4O60343 1298 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 XYLBO75191 536 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 ABLIM3O94929 683 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 KIF20AO95235 890 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 PAPLNO95428 1278 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 TYMPP19971 482 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 PNPLA4P41247 253 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 TAF6P49848 677 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 CYP2J2P51589 502 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 STK4Q13043 487 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 SNRNP35Q16560 246 aaKnown RBP16.99■□□□□ 0.31
CCDC78-216ENST00000544996 OVOS1Q6IE37 1185 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 CBWD2Q8IUF1 395 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 XXYLT1Q8NBI6 393 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 ZNF560Q96MR9 790 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 PDE11AQ9HCR9 933 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 DSEQ9UL01 958 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 MAFFQ9ULX9 164 aa16.99■□□□□ 0.31
CCDC78-216ENST00000544996 BDP1A6H8Y1 2624 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 WDR27A2RRH5 827 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 PRRG1O14668 218 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 CLIC2O15247 247 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 SPTLC1O15269 473 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 TMEM191BP0C7N4 346 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 CPB1P15086 417 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 ATF2P15336 505 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
CCDC78-216ENST00000544996 WNT7BP56706 349 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 SV2CQ496J9 727 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 METTL23Q86XA0 190 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 ZDHHC14Q8IZN3 488 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 CSGALNACT2Q8N6G5 542 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 RDH13Q8NBN7 331 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 FEZF2Q8TBJ5 459 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 ANKRD36BP1Q96IX9 119 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 ITGA11Q9UKX5 1188 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 POLIQ9UNA4 740 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 NCOR1O75376 2440 aa16.98■□□□□ 0.31
CCDC78-216ENST00000544996 CLUHO75153 1309 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 OR6C75A6NL08 312 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 KPNA7A9QM74 516 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 CYB561D2O14569 222 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 CCL16O15467 120 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 PRPF40AO75400 957 aaKnown RBP16.97■□□□□ 0.31
CCDC78-216ENST00000544996 TNNC2P02585 160 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 ITGB3P05106 788 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 KRT19P08727 400 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 POU2F2P09086 479 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 POLR2BP30876 1174 aaKnown RBP16.97■□□□□ 0.31
CCDC78-216ENST00000544996 RBP5P82980 135 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 DPYDQ12882 1025 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 TMEM31Q5JXX7 168 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 C12orf56Q8IXR9 622 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 KIAA0895Q8NCT3 520 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 FNBP1Q96RU3 617 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 CYP4F11Q9HBI6 524 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 INTS13Q9NVM9 706 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 AGAP1Q9UPQ3 857 aa16.97■□□□□ 0.31
CCDC78-216ENST00000544996 EXOC3O60645 756 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 RHOBTB3O94955 611 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 LRG1P02750 347 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 CYP11A1P05108 521 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 GBP2P32456 591 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-216ENST00000544996 FAM160A1Q05DH4 1040 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 DUOXA2Q1HG44 320 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 WDR49Q8IV35 697 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 TCEAL8Q8IYN2 117 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 FMR1NBQ8N0W7 255 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-216ENST00000544996 THEM5Q8N1Q8 247 aa16.96■□□□□ 0.31
CCDC78-216ENST00000544996 LRRC52Q8N7C0 313 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms