RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 HERC2P3Q9BVR0 1158 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 ST6GALNAC4Q9H4F1 302 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 MRPL44Q9H9J2 332 aaKnown RBP8.04□□□□□ -1.12
CPSF7-224ENST00000544990 MAGEF1Q9HAY2 307 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 SLC38A7Q9NVC3 462 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 PANK4Q9NVE7 773 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 MARCH5Q9NX47 278 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 EXOC7Q9UPT5 735 aa8.04□□□□□ -1.12
CPSF7-224ENST00000544990 SF3B1O75533 1304 aaKnown RBP eCLIP8.03□□□□□ -1.127e-6■■■■■ 28.7
CPSF7-224ENST00000544990 A0A087X0B3 334 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 SMIM28A0A1B0GU29 152 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 CASTOR2A6NHX0 329 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 ABLIM1O14639 778 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 OGTO15294 1046 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 POLR2DO15514 142 aaKnown RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 MBTPS2O43462 519 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 TRAPPC3O43617 180 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 CLASP2O75122 1294 aaKnown RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 GCNT3O95395 438 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 PIGRP01833 764 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 CLTAP09496 248 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 IL9P15248 144 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 HOXB8P17481 243 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 KLRC2P26717 231 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 SCNN1AP37088 669 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 GLUD2P49448 558 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 EPHA4P54764 986 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 NUCB2P80303 420 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 FOXK2Q01167 660 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 DSG1Q02413 1049 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 SMAD4Q13485 552 aaKnown RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 KCNC3Q14003 757 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 POSTNQ15063 836 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 PTPN14Q15678 1187 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 CLUL1Q15846 466 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 USP41Q3LFD5 358 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 ZC2HC1CQ53FD0 456 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 XKR4Q5GH76 650 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 GLRA4Q5JXX5 417 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 LLGL2Q6P1M3 1020 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 ELMSAN1Q6PJG2 1045 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 DCLRE1AQ6PJP8 1040 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 SHC4Q6S5L8 630 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 ALKAL1Q6UXT8 129 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 STXBP4Q6ZWJ1 553 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 SFR1Q86XK3 245 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 GPR65Q8IYL9 337 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 CEP120Q8N960 986 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 AUTS2Q8WXX7 1259 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 MSLNLQ96KJ4 702 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 SNX27Q96L92 541 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 KLHL5Q96PQ7 755 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 PPP1R10Q96QC0 940 aaKnown RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 FIZ1Q96SL8 496 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 SCAND2PQ9GZW5 306 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 PLEKHA5Q9HAU0 1116 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 OLFML3Q9NRN5 406 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 KBTBD4Q9NVX7 518 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 CLEC1BQ9P126 229 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 DPP7Q9UHL4 492 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 BARX2Q9UMQ3 279 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-224ENST00000544990 HCFC2Q9Y5Z7 792 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 TTC28Q96AY4 2481 aa8.03□□□□□ -1.12
CPSF7-224ENST00000544990 PDCD11Q14690 1871 aaKnown RBP8.02□□□□□ -1.12
CPSF7-224ENST00000544990 EYSQ5T1H1 3165 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 TMEM189-UBE2V1I3L0A0 370 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 C2CD2LO14523 706 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 XPOTO43592 962 aaKnown RBP8.02□□□□□ -1.13
CPSF7-224ENST00000544990 B3GAT3O94766 335 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 GLP2RO95838 553 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 EFEMP2O95967 443 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 KCNE1P15382 129 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CREMQ03060 361 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 PPP2R3AQ06190 1150 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 NAA30Q147X3 362 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-224ENST00000544990 NAB2Q15742 525 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 SMAD2Q15796 467 aaKnown RBP8.02□□□□□ -1.13
CPSF7-224ENST00000544990 SEZ6Q53EL9 994 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 FAM171A1Q5VUB5 890 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 KIAA0319Q5VV43 1072 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 RESP18Q5W5W9 173 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 ADALQ6DHV7 355 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CES5AQ6NT32 575 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 ANKRD54Q6NXT1 300 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 PDXDC1Q6P996 788 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 TAS1R1Q7RTX1 841 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CEP57Q86XR8 500 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CD302Q8IX05 232 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 RNF168Q8IYW5 571 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-224ENST00000544990 CEP57L1Q8IYX8 460 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 SYCP3Q8IZU3 236 aa8.02□□□□□ -1.13
CPSF7-224ENST00000544990 MEIOBQ8N635 442 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms