RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 TBX20Q9UMR3 447 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
ACTN1-206ENST00000544964 BIN1O00499 593 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 CCL16O15467 120 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 MEFVO15553 781 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-206ENST00000544964 PPP1R37O75864 691 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 RHOBTB3O94955 611 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 POU2F2P09086 479 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 FSHRP23945 695 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 CLCNKBP51801 687 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 KCNA1Q09470 495 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 RAB33AQ14088 237 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 KCNB1Q14721 858 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 UPP1Q16831 310 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 XKR4Q5GH76 650 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 LIN9Q5TKA1 542 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 DTWD2Q8NBA8 298 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 SPATA20Q8TB22 786 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 SLC7A14Q8TBB6 771 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 FGF14Q92915 247 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
ACTN1-206ENST00000544964 RTP3Q9BQQ7 232 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 RPP25Q9BUL9 199 aaKnown RBP13.56□□□□□ -0.24
ACTN1-206ENST00000544964 TARS2Q9BW92 718 aaKnown RBP13.56□□□□□ -0.24
ACTN1-206ENST00000544964 STRA6Q9BX79 667 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 MRPL4Q9BYD3 311 aaKnown RBP13.56□□□□□ -0.24
ACTN1-206ENST00000544964 ST6GALNAC4Q9H4F1 302 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 SLC2A4RGQ9NR83 387 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 CDH7Q9ULB5 785 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 TNFSF13BQ9Y275 285 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 F5P12259 2224 aa13.56□□□□□ -0.24
ACTN1-206ENST00000544964 SMIM28A0A1B0GU29 152 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 I3L4J1 428 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 B3GAT3O94766 335 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 PTMSP20962 102 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 PROZP22891 400 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 TKTP29401 623 aaKnown RBP13.55□□□□□ -0.24
ACTN1-206ENST00000544964 GRM5P41594 1212 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 PSMD2Q13200 908 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 NFKBIBQ15653 356 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 ZNF568Q3ZCX4 644 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 PPM1LQ5SGD2 360 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 L1TD1Q5T7N2 865 aaKnown RBP13.55□□□□□ -0.24
ACTN1-206ENST00000544964 PDXDC1Q6P996 788 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 PARM1Q6UWI2 310 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 ALKAL1Q6UXT8 129 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-206ENST00000544964 MAP4K3Q8IVH8 894 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 SMYD4Q8IYR2 804 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-206ENST00000544964 ITFG1Q8TB96 612 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 FGF13Q92913 245 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 BICD1Q96G01 975 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 SNX27Q96L92 541 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 UROC1Q96N76 676 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 GSDMAQ96QA5 445 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
ACTN1-206ENST00000544964 ARHGEF3Q9NR81 526 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 RMND1Q9NWS8 449 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 HCFC1R1Q9NWW0 138 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 MAN1B1Q9UKM7 699 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 COL4A2P08572 1712 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 DNAH14Q0VDD8 3507 aa13.55□□□□□ -0.24
ACTN1-206ENST00000544964 TISP43B9A030 160 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 OR1D2P34982 312 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 HOXD13P35453 343 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 BRCC3P46736 316 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 KCNN1Q92952 543 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 NKD2Q969F2 451 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-206ENST00000544964 HVCN1Q96D96 273 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-206ENST00000544964 ZMAT2Q96NC0 199 aaKnown RBP13.54□□□□□ -0.24
ACTN1-206ENST00000544964 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 KIAA1468Q9P260 1216 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 MAPK8IP1Q9UQF2 711 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 BACE2Q9Y5Z0 518 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 CDY1Q9Y6F8 540 aa13.54□□□□□ -0.24
ACTN1-206ENST00000544964 ZFP37Q9Y6Q3 630 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-206ENST00000544964 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 EIF3DO15371 548 aaKnown RBP eCLIP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 XYLBO75191 536 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 HARSP12081 509 aaKnown RBP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 SCP2P22307 547 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 ABCD1P33897 745 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
ACTN1-206ENST00000544964 LIG4P49917 911 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 OSTNP61366 133 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 ALCAMQ13740 583 aa13.53□□□□□ -0.24
ACTN1-206ENST00000544964 MORC3Q14149 939 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms