RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.68■□□□□ 0.42
DDX55-212ENST00000544738 GPBP1Q86WP2 473 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 KCNN1Q92952 543 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 CHRDQ9H2X0 955 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 LMAN1LQ9HAT1 526 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 GOLGA2P5Q9HBQ8 144 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 ANKFY1Q9P2R3 1169 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 MTRRQ9UBK8 725 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 MRPS23Q9Y3D9 190 aaKnown RBP17.68■□□□□ 0.42
DDX55-212ENST00000544738 SDK1Q7Z5N4 2213 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 SHISA7A6NL88 538 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 MAN2B1O00754 1011 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 HRO43593 1189 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 ECI2O75521 394 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 HARSP12081 509 aaKnown RBP17.67■□□□□ 0.42
DDX55-212ENST00000544738 HOXA9P31269 272 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 ABCD1P33897 745 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 OR1D2P34982 312 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 SOX4Q06945 474 aaPredicted RBP17.67■□□□□ 0.42
DDX55-212ENST00000544738 MCL1Q07820 350 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 SRSF5Q13243 272 aaKnown RBP17.67■□□□□ 0.42
DDX55-212ENST00000544738 RAB33AQ14088 237 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 UVSSAQ2YD98 709 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 TANGO2Q6ICL3 276 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 SLC7A14Q8TBB6 771 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 ZBTB45Q96K62 511 aaPredicted RBP17.67■□□□□ 0.42
DDX55-212ENST00000544738 REEP2Q9BRK0 252 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 DNMT3BQ9UBC3 853 aaKnown RBP17.67■□□□□ 0.42
DDX55-212ENST00000544738 KCNH3Q9ULD8 1083 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.67■□□□□ 0.42
DDX55-212ENST00000544738 BACE2Q9Y5Z0 518 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 MYH11P35749 1972 aa17.67■□□□□ 0.42
DDX55-212ENST00000544738 NPHP3-ACAD11A0A0J9YXS1 232 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 CHURC1-FNTBB4DL54 471 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 PODXLO00592 558 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 FAM13AO94988 1023 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 KRT18P05783 430 aaKnown RBP17.66■□□□□ 0.42
DDX55-212ENST00000544738 PLCG1P19174 1290 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX55-212ENST00000544738 CXCL12P48061 93 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 FNTBP49356 437 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 CCR3P51677 355 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
DDX55-212ENST00000544738 DHX8Q14562 1220 aaKnown RBP17.66■□□□□ 0.42
DDX55-212ENST00000544738 ACAP1Q15027 740 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 KYAT1Q16773 422 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 AXDND1Q5T1B0 1012 aaPredicted RBP17.66■□□□□ 0.42
DDX55-212ENST00000544738 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 C3orf58Q8NDZ4 430 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 RAD54LQ92698 747 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 BICD1Q96G01 975 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 INTS4Q96HW7 963 aaKnown RBP17.66■□□□□ 0.42
DDX55-212ENST00000544738 ZMAT2Q96NC0 199 aaKnown RBP17.66■□□□□ 0.42
DDX55-212ENST00000544738 CCSER1Q9C0I3 900 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 PLEKHA5Q9HAU0 1116 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 PARVGQ9HBI0 331 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 BLOC1S4Q9NUP1 217 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 NUB1Q9Y5A7 615 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 TRIP11Q15643 1979 aa17.66■□□□□ 0.42
DDX55-212ENST00000544738 ADAM12O43184 909 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 PROS1P07225 676 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 CLTAP09496 248 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 TKTP29401 623 aaKnown RBP17.65■□□□□ 0.42
DDX55-212ENST00000544738 DDIT3P35638 169 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 BRCC3P46736 316 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 ZNF131P52739 623 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 SHC2P98077 582 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 SATB1Q01826 763 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 GRM2Q14416 872 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 MCM6Q14566 821 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 KARSQ15046 597 aaKnown RBP17.65■□□□□ 0.42
DDX55-212ENST00000544738 AASDHQ4L235 1098 aaPredicted RBP17.65■□□□□ 0.42
DDX55-212ENST00000544738 MAMSTRQ6ZN01 415 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 LARP4BQ92615 738 aaKnown RBP17.65■□□□□ 0.42
DDX55-212ENST00000544738 BACH2Q9BYV9 841 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 BRD9Q9H8M2 597 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 CDY1Q9Y6F8 540 aa17.65■□□□□ 0.42
DDX55-212ENST00000544738 SYN3O14994 580 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 TRAK2O60296 914 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 FOXD2O60548 495 aaPredicted RBP17.64■□□□□ 0.41
DDX55-212ENST00000544738 TBCAO75347 108 aaKnown RBP17.64■□□□□ 0.41
DDX55-212ENST00000544738 POU2F2P09086 479 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 SYT1P21579 422 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 LIG4P49917 911 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 GRIN1Q05586 938 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 SLC10A6Q3KNW5 377 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 HEATR6Q6AI08 1181 aaKnown RBP17.64■□□□□ 0.41
DDX55-212ENST00000544738 ZNF687Q8N1G0 1237 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 FAM3CQ92520 227 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 GDE1Q9NZC3 331 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 CCDC39Q9UFE4 941 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 TBX20Q9UMR3 447 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 CLIC4Q9Y696 253 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 CITO14578 2027 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 RALGAPA1Q6GYQ0 2036 aa17.64■□□□□ 0.41
DDX55-212ENST00000544738 PKD1L2Q7Z442 2459 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 VWA8A3KMH1 1905 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 H7C4K7 107 aa17.63■□□□□ 0.41
DDX55-212ENST00000544738 I3L4J1 428 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms