RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 ZNF516Q92618 1163 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 CAMKK2Q96RR4 588 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 SH2D3AQ9BRG2 576 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 SLC40A1Q9NP59 571 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 ZNF214Q9UL59 606 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-223ENST00000544669 GSTTP1A0A1W2PQM5 241 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 SMIM23A6NLE4 172 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 RALAP11233 206 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 PTPRAP18433 802 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 KCNA3P22001 575 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 EIF4BP23588 611 aaKnown RBP13.83□□□□□ -0.2
CPSF7-223ENST00000544669 TMEM270Q6UE05 265 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 TRPM8Q7Z2W7 1104 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 TDRPQ86YL5 185 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 RBBP8NLQ8NC74 664 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-223ENST00000544669 C2orf40Q9H1Z8 148 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 YY1AP1Q9H869 796 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 ACP6Q9NPH0 428 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 NEU2Q9Y3R4 380 aa13.83□□□□□ -0.2
CPSF7-223ENST00000544669 USP15Q9Y4E8 981 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-223ENST00000544669 ADGRA3Q8IWK6 1321 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 IGKV6D-21A0A0A0MT36 114 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 MMP8P22894 467 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 NOP14P78316 857 aaKnown RBP13.82□□□□□ -0.2
CPSF7-223ENST00000544669 IL9RQ01113 521 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 NFX1Q12986 1120 aaKnown RBP13.82□□□□□ -0.2
CPSF7-223ENST00000544669 SNX1Q13596 522 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 NCOA4Q13772 614 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 EAPPQ56P03 285 aaPredicted RBP13.82□□□□□ -0.2
CPSF7-223ENST00000544669 DALRD3Q5D0E6 543 aaKnown RBP13.82□□□□□ -0.2
CPSF7-223ENST00000544669 KCNV1Q6PIU1 500 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 TAS1R3Q7RTX0 852 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 TRMT1LQ7Z2T5 733 aaKnown RBP13.82□□□□□ -0.2
CPSF7-223ENST00000544669 POLNQ7Z5Q5 900 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 ANKS1BQ7Z6G8 1248 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 PARP9Q8IXQ6 854 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 LRRC34Q8IZ02 419 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 CKAP2Q8WWK9 683 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 MAGEB18Q96M61 343 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 PI4K2AQ9BTU6 479 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 CHST7Q9NS84 486 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 HAUS2Q9NVX0 235 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 FETUBQ9UGM5 382 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 BCS1LQ9Y276 419 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 SMCHD1A6NHR9 2005 aa13.82□□□□□ -0.2
CPSF7-223ENST00000544669 TMEM120BA0PK00 339 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 LRRIQ4A6NIV6 560 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 MED7O43513 233 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 ADCY3O60266 1144 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 SNX3O60493 162 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 ACSL3O95573 720 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 STX2P32856 288 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 RIPK1Q13546 671 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 MXD4Q14582 209 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-223ENST00000544669 MORF4L2Q15014 288 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 WDR78Q5VTH9 848 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 IER5Q5VY09 327 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 IZUMO3Q5VZ72 239 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 HIBCHQ6NVY1 386 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-223ENST00000544669 BRSK2Q8IWQ3 736 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 FUKQ8N0W3 1084 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 C11orf70Q9BRQ4 267 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 MRPL4Q9BYD3 311 aaKnown RBP13.81□□□□□ -0.2
CPSF7-223ENST00000544669 FAM124BQ9H5Z6 455 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-223ENST00000544669 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 WDR35Q9P2L0 1181 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 CHORDC1Q9UHD1 332 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-223ENST00000544669 SMG5Q9UPR3 1016 aaKnown RBP13.81□□□□□ -0.2
CPSF7-223ENST00000544669 ARL2BPQ9Y2Y0 163 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 RIPK3Q9Y572 518 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 UMODL1Q5DID0 1318 aa13.81□□□□□ -0.2
CPSF7-223ENST00000544669 TMEM191CA6NGB0 347 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TOM1L1O75674 476 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ATP5HO75947 161 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 RGS20O76081 388 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TMEM191BP0C7N4 346 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 BRAFP15056 766 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TSHRP16473 764 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 GLRA2P23416 452 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 SSR1P43307 286 aaKnown RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 SLCO1A2P46721 670 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ZNF132P52740 706 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 NLRP11P59045 1033 aaKnown RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 LONRF1Q17RB8 773 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 DUOXA2Q1HG44 320 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 NOL9Q5SY16 702 aaKnown RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 CYB5D1Q6P9G0 228 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 DCUN1D2Q6PH85 259 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ZBTB8OSQ8IWT0 167 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ZNF606Q8WXB4 792 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ELAC2Q9BQ52 826 aaKnown RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TRIM7Q9C029 511 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 KCNK9Q9NPC2 374 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 NINJ2Q9NZG7 142 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 HACL1Q9UJ83 578 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 TPX2Q9ULW0 747 aaKnown RBP13.8□□□□□ -0.2
CPSF7-223ENST00000544669 PCDHGC3Q9UN70 934 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 SLC12A4Q9UP95 1085 aa13.8□□□□□ -0.2
CPSF7-223ENST00000544669 ADGRA2Q96PE1 1338 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms