RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 TBX2Q13207 712 aaPredicted RBP10.24□□□□□ -0.77
YBX3-215ENST00000544504 NCOA4Q13772 614 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 IKBKEQ14164 716 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 GPNMBQ14956 572 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 SGSM1Q2NKQ1 1148 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 CBWD6Q4V339 395 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 EPC2Q52LR7 807 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 CBWD3Q5JTY5 395 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 CBWD5Q5RIA9 395 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 JADE1Q6IE81 842 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 TRIM65Q6PJ69 517 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 GLB1LQ6UWU2 654 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 ALKAL1Q6UXT8 129 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 C15orf39Q6ZRI6 1047 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 EP400NLQ6ZTU2 488 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 ENOSF1Q7L5Y1 443 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 ECHDC2Q86YB7 292 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 SUGP1Q8IWZ8 645 aaKnown RBP10.24□□□□□ -0.77
YBX3-215ENST00000544504 SPC24Q8NBT2 197 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 SMG8Q8ND04 991 aaKnown RBP10.24□□□□□ -0.77
YBX3-215ENST00000544504 DBF4BQ8NFT6 615 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 URGCPQ8TCY9 931 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 JAKMIP2Q96AA8 810 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 KIF12Q96FN5 646 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 SAMD11Q96NU1 681 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 NT5C1BQ96P26 610 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 C17orf80Q9BSJ5 609 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 CRACR2AQ9BSW2 395 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 INTS2Q9H0H0 1204 aaKnown RBP10.24□□□□□ -0.77
YBX3-215ENST00000544504 IRF2BPLQ9H1B7 796 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 ZNHIT6Q9NWK9 470 aaKnown RBP10.24□□□□□ -0.77
YBX3-215ENST00000544504 TMEM161AQ9NX61 479 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 CAPN11Q9UMQ6 739 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 CITO14578 2027 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 SCN5AQ14524 2016 aa10.24□□□□□ -0.77
YBX3-215ENST00000544504 INPPL1O15357 1258 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 MGEA5O60502 916 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 HLA-DRAP01903 254 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 CCDC172P0C7W6 258 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 ATF7P17544 494 aaPredicted RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 TBXAS1P24557 533 aaPredicted RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 DEKP35659 375 aaKnown RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 PNPLA4P41247 253 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 MFAP3P55082 362 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 YWHAEP62258 255 aaKnown RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 RBP5P82980 135 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 MYO1EQ12965 1108 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 SMAD2Q15796 467 aaKnown RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 HS1BP3Q53T59 392 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 TCEAL5Q5H9L2 206 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 KLHDC7AQ5VTJ3 777 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 TDRD10Q5VZ19 366 aaKnown RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 RNF135Q8IUD6 432 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 TMEM192Q8IY95 271 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 ABI1Q8IZP0 508 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 TTC39CQ8N584 583 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 CCDC112Q8NEF3 446 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 PBXIP1Q96AQ6 731 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 TRIM44Q96DX7 344 aaPredicted RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 MTMR12Q9C0I1 747 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 DNAI2Q9GZS0 605 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 FAM124BQ9H5Z6 455 aaPredicted RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 NSUN3Q9H649 340 aaKnown RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 RSAD1Q9HA92 442 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 FAM207AQ9NSI2 230 aaPredicted RBP10.23□□□□□ -0.77
YBX3-215ENST00000544504 DPP3Q9NY33 737 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 CLDND1Q9NY35 253 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 KANSL3Q9P2N6 904 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 APEX2Q9UBZ4 518 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 LRFN2Q9ULH4 789 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 HES2Q9Y543 173 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 PCDHB7Q9Y5E2 793 aa10.23□□□□□ -0.77
YBX3-215ENST00000544504 SMIM28A0A1B0GU29 152 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 CARNS1A5YM72 827 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 TMEM221A6NGB7 291 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 H3BNC9 293 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 M0R296 226 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 ENPP3O14638 875 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 MFAP3LO75121 409 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 STAU1O95793 577 aaKnown RBP10.22□□□□□ -0.77
YBX3-215ENST00000544504 GYPCP04921 128 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 THP07101 528 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 NFICP08651 508 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 UCHL3P15374 230 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 SLC9A1P19634 815 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 AKAP5P24588 427 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 RPL9P32969 192 aaKnown RBP10.22□□□□□ -0.77
YBX3-215ENST00000544504 KRT9P35527 623 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 GCNT1Q02742 428 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 GRIK3Q13003 919 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 ZBTB6Q15916 424 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 FAM117BQ6P1L5 589 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 AGMOQ6ZNB7 445 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 TRIM67Q6ZTA4 783 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 ERMP1Q7Z2K6 904 aa10.22□□□□□ -0.77
YBX3-215ENST00000544504 ZNF598Q86UK7 904 aaKnown RBP10.22□□□□□ -0.77
YBX3-215ENST00000544504 NPAS4Q8IUM7 802 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms