RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 P4HA1P13674 534 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 YWHAEP62258 255 aaKnown RBP32.59■■■□□ 2.81
CCM2-219ENST00000544363 FAAP100Q0VG06 881 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 MYO1EQ12965 1108 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 NAB2Q15742 525 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 TRIM60Q495X7 471 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 DNTTIP2Q5QJE6 756 aaKnown RBP32.59■■■□□ 2.81
CCM2-219ENST00000544363 CCDC122Q5T0U0 273 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 C9orf57Q5W0N0 161 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 ALKBH5Q6P6C2 394 aaKnown RBP32.59■■■□□ 2.81
CCM2-219ENST00000544363 SCARA5Q6ZMJ2 495 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 TXLNBQ8N3L3 684 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 LRRC52Q8N7C0 313 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 PGBD4Q96DM1 585 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 PPP1R10Q96QC0 940 aaKnown RBP32.59■■■□□ 2.81
CCM2-219ENST00000544363 GAD1Q99259 594 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 CISHQ9NSE2 258 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 TFR2Q9UP52 801 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 ANO9A1A5B4 782 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 NBNO60934 754 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 ABL1P00519 1130 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 TUBB4AP04350 444 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 WEE2P0C1S8 567 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 ATF7P17544 494 aaPredicted RBP32.59■■■□□ 2.81
CCM2-219ENST00000544363 MLH1P40692 756 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 TLE2Q04725 743 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 RPUSD2Q8IZ73 545 aaKnown RBP32.59■■■□□ 2.81
CCM2-219ENST00000544363 RPS6KC1Q96S38 1066 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 LACRTQ9GZZ8 138 aa32.59■■■□□ 2.81
CCM2-219ENST00000544363 CHRNB2P17787 502 aa32.58■■■□□ 2.81
CCM2-219ENST00000544363 KIF5AQ12840 1032 aa32.58■■■□□ 2.81
CCM2-219ENST00000544363 GPNMBQ14956 572 aa32.58■■■□□ 2.81
CCM2-219ENST00000544363 RTN4RL1Q86UN2 441 aaPredicted RBP32.58■■■□□ 2.81
CCM2-219ENST00000544363 ECHDC2Q86YB7 292 aa32.58■■■□□ 2.81
CCM2-219ENST00000544363 RBBP8NLQ8NC74 664 aaPredicted RBP32.58■■■□□ 2.81
CCM2-219ENST00000544363 GSTCDQ8NEC7 633 aa32.58■■■□□ 2.81
CCM2-219ENST00000544363 FTHL17Q9BXU8 183 aa32.58■■■□□ 2.81
CCM2-219ENST00000544363 TSGA10Q9BZW7 698 aa32.58■■■□□ 2.81
CCM2-219ENST00000544363 ARL5CA6NH57 179 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 PPEF2O14830 753 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 PJA2O43164 708 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 KRT86O43790 486 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 CD58P19256 250 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 ZNF132P52740 706 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 SOX4Q06945 474 aaPredicted RBP32.57■■■□□ 2.8
CCM2-219ENST00000544363 DDX1Q92499 740 aaKnown RBP32.57■■■□□ 2.8
CCM2-219ENST00000544363 CYP3A43Q9HB55 503 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 UBN1Q9NPG3 1134 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 SLC38A7Q9NVC3 462 aa32.57■■■□□ 2.8
CCM2-219ENST00000544363 PIRO00625 290 aa32.56■■■□□ 2.8
CCM2-219ENST00000544363 CDR2Q01850 454 aa32.56■■■□□ 2.8
CCM2-219ENST00000544363 TAF3Q5VWG9 929 aa32.56■■■□□ 2.8
CCM2-219ENST00000544363 RNF169Q8NCN4 708 aa32.56■■■□□ 2.8
CCM2-219ENST00000544363 HIPK3Q9H422 1215 aa32.56■■■□□ 2.8
CCM2-219ENST00000544363 RSAD1Q9HA92 442 aa32.56■■■□□ 2.8
CCM2-219ENST00000544363 SEPT11Q9NVA2 429 aaKnown RBP32.56■■■□□ 2.8
CCM2-219ENST00000544363 TRIM10Q9UDY6 481 aa32.56■■■□□ 2.8
CCM2-219ENST00000544363 C9IYK1 514 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 ETF1P62495 437 aaKnown RBP32.55■■■□□ 2.8
CCM2-219ENST00000544363 TNNC1P63316 161 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 PLEKHG4Q58EX7 1191 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 FAM43BQ6ZT52 329 aaPredicted RBP32.55■■■□□ 2.8
CCM2-219ENST00000544363 SLC24A5Q71RS6 500 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 ZNF598Q86UK7 904 aaKnown RBP32.55■■■□□ 2.8
CCM2-219ENST00000544363 ZNF677Q86XU0 584 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 LINC01599Q8WXQ3 324 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 TSPYL2Q9H2G4 693 aaPredicted RBP32.55■■■□□ 2.8
CCM2-219ENST00000544363 C11orf49Q9H6J7 331 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 MIOSQ9NXC5 875 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 GUCA1BQ9UMX6 200 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 THP07101 528 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 CAPN2P17655 700 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 LRPAP1P30533 357 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 FMO1Q01740 532 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 SDCBP2Q9H190 292 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 SMYD3Q9H7B4 428 aa32.55■■■□□ 2.8
CCM2-219ENST00000544363 GTF3C5Q9Y5Q8 519 aaPredicted RBP32.55■■■□□ 2.8
CCM2-219ENST00000544363 MMEP08473 750 aa32.54■■■□□ 2.8
CCM2-219ENST00000544363 RAP1GAPP47736 663 aa32.54■■■□□ 2.8
CCM2-219ENST00000544363 FAM189BP81408 668 aa32.54■■■□□ 2.8
CCM2-219ENST00000544363 PAWRQ96IZ0 340 aaKnown RBP32.54■■■□□ 2.8
CCM2-219ENST00000544363 TMEM106CQ9BVX2 250 aa32.54■■■□□ 2.8
CCM2-219ENST00000544363 FAM124BQ9H5Z6 455 aaPredicted RBP32.54■■■□□ 2.8
CCM2-219ENST00000544363 GOLGA2P5Q9HBQ8 144 aa32.54■■■□□ 2.8
CCM2-219ENST00000544363 ATP8B3O60423 1300 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 SCN1AP35498 2009 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 KIF5CO60282 957 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 EOMESO95936 686 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 CALCAP01258 141 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 IBSPP21815 317 aaPredicted RBP32.53■■■□□ 2.8
CCM2-219ENST00000544363 PNPLA4P41247 253 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 AFF1P51825 1210 aaKnown RBP32.53■■■□□ 2.8
CCM2-219ENST00000544363 CDH8P55286 799 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 PALB2Q86YC2 1186 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 DBF4BQ8NFT6 615 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 ZNF560Q96MR9 790 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 PCDHB18PQ96TA0 734 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 IRX2Q9BZI1 471 aaPredicted RBP32.53■■■□□ 2.8
CCM2-219ENST00000544363 ATP11BQ9Y2G3 1177 aa32.53■■■□□ 2.8
CCM2-219ENST00000544363 PARNO95453 639 aaKnown RBP32.52■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms