RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MCM3APO60318 1980 aa16.77■□□□□ 0.28
SNRNP70-203ENST00000544278 RAB6CQ53S08 254 aa16.77■□□□□ 0.28
SNRNP70-203ENST00000544278 ZNF606Q8WXB4 792 aa16.77■□□□□ 0.28
SNRNP70-203ENST00000544278 RAB6CQ9H0N0 254 aa16.77■□□□□ 0.28
SNRNP70-203ENST00000544278 AAASQ9NRG9 546 aa16.77■□□□□ 0.28
SNRNP70-203ENST00000544278 PCDHB2Q9Y5E7 798 aa16.77■□□□□ 0.28
SNRNP70-203ENST00000544278 KAT6AQ92794 2004 aa16.77■□□□□ 0.27
SNRNP70-203ENST00000544278 OGDHQ02218 1023 aa16.77■□□□□ 0.27
SNRNP70-203ENST00000544278 GAD2Q05329 585 aa16.77■□□□□ 0.27
SNRNP70-203ENST00000544278 CCDC33Q8N5R6 958 aa16.77■□□□□ 0.27
SNRNP70-203ENST00000544278 PCSK1NQ9UHG2 260 aa16.77■□□□□ 0.27
SNRNP70-203ENST00000544278 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.27
SNRNP70-203ENST00000544278 LAMA3Q16787 3333 aa16.77■□□□□ 0.27
SNRNP70-203ENST00000544278 TP73O15350 636 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 GH1P01241 217 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 VIMP08670 466 aaKnown RBP16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 TMEM62Q0P6H9 643 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 MAMLD1Q13495 774 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 GIMAP7Q8NHV1 300 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 RPS6KC1Q96S38 1066 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 PAIP2Q9BPZ3 127 aaKnown RBP16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 DHX33Q9H6R0 707 aaKnown RBP16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 DONSONQ9NYP3 566 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 IVNS1ABPQ9Y6Y0 642 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 CYP2C8P10632 490 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 NOMO3P69849 1222 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 MTMR3Q13615 1198 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 DDX27Q96GQ7 796 aaKnown RBP16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 MTRF1LQ9UGC7 380 aaKnown RBP16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 HMGXB4Q9UGU5 601 aa16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 LAMA2P24043 3122 aaKnown RBP16.76■□□□□ 0.27
SNRNP70-203ENST00000544278 GMNCA6NCL1 334 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 RIPK2O43353 540 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 GRAP2O75791 330 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 CLTAP09496 248 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 CXCL8P10145 99 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 GARTP22102 1010 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 GHRHRQ02643 423 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 DHX34Q14147 1143 aaKnown RBP16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 PSMD6Q15008 389 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 GPAT2Q6NUI2 795 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 DCUN1D2Q6PH85 259 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 MFSD7Q6UXD7 560 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 SEC14L1Q92503 715 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 CPB2Q96IY4 423 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 SCLT1Q96NL6 688 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 PASKQ96RG2 1323 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 EVPLQ92817 2033 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 BHMG1C9JSJ3 638 aaPredicted RBP16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 CETPP11597 493 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 RPS12P25398 132 aaKnown RBP16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 ACTN3Q08043 901 aaPredicted RBP16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 CYP4X1Q8N118 509 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.75■□□□□ 0.277e-66■■■■□ 25.2
SNRNP70-203ENST00000544278 TXLNGYQ9BZA5 131 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 SPATC1LQ9H0A9 340 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 MAFBQ9Y5Q3 323 aaPredicted RBP16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 A0A0B4J269 797 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 FAM187AA6NFU0 413 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 RASGRF2O14827 1237 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 GCNT1Q02742 428 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 LRIG3Q6UXM1 1119 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 MON1BQ7L1V2 547 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 UVRAGQ9P2Y5 699 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 ZNF112Q9UJU3 913 aa16.75■□□□□ 0.27
SNRNP70-203ENST00000544278 SSC5DA1L4H1 1573 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 IQCF3P0C7M6 154 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 LAMTOR4Q0VGL1 99 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 TAF5Q15542 800 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 USP37Q86T82 979 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 RPAINQ86UA6 219 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 SUGP1Q8IWZ8 645 aaKnown RBP16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 ELAC2Q9BQ52 826 aaKnown RBP16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 OSBPL8Q9BZF1 889 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 CXCL16Q9H2A7 254 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 DNPEPQ9ULA0 475 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 WDR81Q562E7 1941 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 CNTNAP2Q9UHC6 1331 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 PSME4Q14997 1843 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 LRRC34Q8IZ02 419 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 ABRAQ8N0Z2 381 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 CABS1Q96KC9 395 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 CISHQ9NSE2 258 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 KRT1P04264 644 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 PRKCBP05771 671 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 ARL2P36404 184 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 TRPC3Q13507 836 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 SMAD1Q15797 465 aaKnown RBP16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 CEP57Q86XR8 500 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 SPATA33Q96N06 139 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 ASCC2Q9H1I8 757 aaPredicted RBP16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 ADAM7Q9H2U9 754 aa16.74■□□□□ 0.27
SNRNP70-203ENST00000544278 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms