RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CBWD6Q4V339 395 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CBWD3Q5JTY5 395 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CBWD5Q5RIA9 395 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CDKAL1Q5VV42 579 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KIAA1841Q6NSI8 718 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CD300LGQ6UXG3 332 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C15orf39Q6ZRI6 1047 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CCDC150Q8NCX0 1101 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CXorf38Q8TB03 319 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MICAL1Q8TDZ2 1067 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 VN1R3Q9BXE9 311 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 IMPG2Q9BZV3 1241 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ENTPD7Q9NQZ7 604 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TLR9Q9NR96 1032 aa15.58■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MYO9BQ13459 2157 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SPTLC1O15269 473 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 VNN1O95497 513 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 HLA-DRAP01903 254 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PAX3P23760 479 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 DNAJB1P25685 340 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 MYL6P60660 151 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CETN1Q12798 172 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PTPROQ16827 1216 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 USP41Q3LFD5 358 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 Q7L0L9 218 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TAS1R1Q7RTX1 841 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TMC7Q7Z402 723 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 FBXL13Q8NEE6 735 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TAS1R2Q8TE23 839 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SUSD3Q96L08 255 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 B3GALT6Q96L58 329 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TCF25Q9BQ70 676 aa15.58■□□□□ 0.08
TNFRSF1A-216ENST00000543995 C2CD2LO14523 706 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 URODP06132 367 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TKTP29401 623 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ATICP31939 592 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TNNC1P63316 161 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SGSM1Q2NKQ1 1148 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ZNF699Q32M78 642 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 DEFB123Q8N688 67 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SENP8Q96LD8 212 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 HERC2P3Q9BVR0 1158 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 LMAN2LQ9H0V9 348 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.57■□□□□ 0.083e-10■■■■■ 130.4
TNFRSF1A-216ENST00000543995 TAB2Q9NYJ8 693 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SNX9Q9Y5X1 595 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 VWA8A3KMH1 1905 aa15.57■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ARHGEF37A1IGU5 675 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CYB561D2O14569 222 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 LPXNO60711 386 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ODC1P11926 461 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 GLUD2P49448 558 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 AARSP49588 968 aaKnown RBP eCLIP15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ERVFC1P60507 584 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 KRT31Q15323 416 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 WDR72Q3MJ13 1102 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 VWA3BQ502W6 1294 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ZNF667Q5HYK9 610 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PLPP4Q5VZY2 271 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 RNF168Q8IYW5 571 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 RNF214Q8ND24 703 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ELMO3Q96BJ8 720 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 MMS19Q96T76 1030 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 GAS2L1Q99501 681 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PI4K2AQ9BTU6 479 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TTPALQ9BTX7 342 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ZBP1Q9H171 429 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 HSD3B7Q9H2F3 369 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 MRPL17Q9NRX2 175 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 RAB20Q9NX57 234 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 NXF1Q9UBU9 619 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 PCDHB8Q9UN66 801 aa15.56■□□□□ 0.08
TNFRSF1A-216ENST00000543995 M0QZQ0 153 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SYN3O14994 580 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 P4HA2O15460 535 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 HUS1O60921 280 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CXCL14O95715 111 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 EFEMP2O95967 443 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CTSAP10619 480 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ZNF18P17022 549 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 IRS1P35568 1242 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 CAMK1Q14012 370 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SMC1AQ14683 1233 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 WDR44Q5JSH3 913 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 RTP2Q5QGT7 225 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 APPL2Q8NEU8 664 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 AUTS2Q8WXX7 1259 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 RIN2Q8WYP3 895 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TAF4BQ92750 862 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 XYLT2Q9H1B5 865 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 VPS16Q9H269 839 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 NDST4Q9H3R1 872 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 GDAP2Q9NXN4 497 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 SSX2IPQ9Y2D8 614 aa15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 TIMM13Q9Y5L4 95 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ATG2AQ2TAZ0 1938 aa15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1A-216ENST00000543995 STAU1O95793 577 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms