RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	METTL23	Q86XA0	190 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	ADHFE1	Q8IWW8	467 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	SMG7	Q92540	1137 aa	Known RBP	11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	SMARCE1	Q969G3	411 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	SUSD3	Q96L08	255 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	SENP8	Q96LD8	212 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	TSPAN18	Q96SJ8	248 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	PHF7	Q9BWX1	381 aa	Predicted RBP	11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	MTMR12	Q9C0I1	747 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	POMK	Q9H5K3	350 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	KIAA1586	Q9HCI6	787 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	MTRR	Q9UBK8	725 aa		11.94	□□□□□ -0.5
DDB1-222	ENST00000543627	PIR	O00625	290 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	SPTLC1	O15269	473 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	CALU	O43852	315 aa	Predicted RBP	11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	PHACTR2	O75167	634 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	RHOBTB3	O94955	611 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	KIF20A	O95235	890 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	C8A	P07357	584 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	OR4Q2	P0C623	313 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	ODC1	P11926	461 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	TAF6	P49848	677 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	ZP2	Q05996	745 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	SNW1	Q13573	536 aa	Known RBP	11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	SURF1	Q15526	300 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	OVOS1	Q6IE37	1185 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	ZNF280D	Q6N043	979 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	ENGASE	Q8NFI3	743 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	OR5B17	Q8NGF7	314 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	GOLGA5	Q8TBA6	731 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	SLC7A14	Q8TBB6	771 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	PGLYRP2	Q96PD5	576 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	PLEKHA4	Q9H4M7	779 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	CYP4F11	Q9HBI6	524 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	RMND1	Q9NWS8	449 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	FBXL5	Q9UKA1	691 aa		11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.93	□□□□□ -0.5
DDB1-222	ENST00000543627	KPNA7	A9QM74	516 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	GBP2	P32456	591 aa	Predicted RBP	11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	CASP4	P49662	377 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	SNRPF	P62306	86 aa	Known RBP	11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	RBP5	P82980	135 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	POU5F1	Q01860	360 aa	Known RBP	11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	ROR1	Q01973	937 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	RAB33A	Q14088	237 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	DUOXA2	Q1HG44	320 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	BMT2	Q1RMZ1	405 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	SV2C	Q496J9	727 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	SCARA3	Q6AZY7	606 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	LILRA6	Q6PI73	481 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	GPR149	Q86SP6	731 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	NT5DC4	Q86YG4	428 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	GPR65	Q8IYL9	337 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	THEM5	Q8N1Q8	247 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	C1orf127	Q8N9H9	656 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	SUSD6	Q92537	303 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	ZNF560	Q96MR9	790 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	NECTIN4	Q96NY8	510 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	MMRN2	Q9H8L6	949 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	INTS13	Q9NVM9	706 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	CGN	Q9P2M7	1197 aa	Known RBP	11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	PRKAG3	Q9UGI9	489 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	FRMD4B	Q9Y2L6	1034 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	PCDHA5	Q9Y5H7	936 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	SNX9	Q9Y5X1	595 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	BACE2	Q9Y5Z0	518 aa		11.92	□□□□□ -0.5
DDB1-222	ENST00000543627	PLXNA3	P51805	1871 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	ANO9	A1A5B4	782 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	WDR27	A2RRH5	827 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627		M0QZQ0	153 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	BIN1	O00499	593 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	PDXK	O00764	312 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	ZMYND10	O75800	440 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	LRG1	P02750	347 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	NR3C1	P04150	777 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	NTHL1	P78549	312 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	CYP24A1	Q07973	514 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	ADCY1	Q08828	1119 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	BIRC3	Q13489	604 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	TRPC3	Q13507	836 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	KCNB1	Q14721	858 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	CAMK4	Q16566	473 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	WSCD1	Q658N2	575 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	RNF19B	Q6ZMZ0	732 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	CCDC149	Q6ZUS6	474 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	RNF135	Q8IUD6	432 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	EEF2KMT	Q96G04	330 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	TMEM209	Q96SK2	561 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	MMS19	Q96T76	1030 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	PRKD2	Q9BZL6	878 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	KCTD10	Q9H3F6	313 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	FBXW11	Q9UKB1	542 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	NR2E1	Q9Y466	385 aa		11.91	□□□□□ -0.5
DDB1-222	ENST00000543627	PTPRJ	Q12913	1337 aa		11.9	□□□□□ -0.5
DDB1-222	ENST00000543627	VWA8	A3KMH1	1905 aa		11.9	□□□□□ -0.5
DDB1-222	ENST00000543627	ARHGEF37	A1IGU5	675 aa		11.9	□□□□□ -0.5
DDB1-222	ENST00000543627	C2CD4D	B7Z1M9	353 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms