RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PRLRP16471 622 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 NNMTP40261 264 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 LAMB3Q13751 1172 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 TRIP10Q15642 601 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 MMP19Q99542 508 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 AGAP1Q9UPQ3 857 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 hCG_2014768A0A024R1R8 64 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 AKAP10O43572 662 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 MYL2P10916 166 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 RPA1P27694 616 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 ACOT2P49753 483 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 USP10Q14694 798 aaKnown RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 ZNF668Q96K58 619 aaPredicted RBP13.75□□□□□ -0.21
TNC-212ENST00000542877 PPP1R2P1Q96PQ5 205 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
TNC-212ENST00000542877 SRP72O76094 671 aaKnown RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 RALAP11233 206 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 CDY2AQ9Y6F7 541 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 CDY1Q9Y6F8 540 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 ASB14A6NK59 587 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 DAB1O75553 588 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 HSPA1AP0DMV8 641 aaKnown RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 HSPA1BP0DMV9 641 aaKnown RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 HNRNPH1P31943 449 aaKnown RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 TRPC1P48995 793 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 RAD51Q06609 339 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 LRRC36Q1X8D7 754 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 C16orf86Q6ZW13 317 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 KIF2BQ8N4N8 673 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 E2F7Q96AV8 911 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 ZNF229Q9UJW7 825 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 CDYLQ9Y232 598 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 KDM1AO60341 852 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 HMOX2P30519 316 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 PPIL6Q8IXY8 311 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 TPCN2Q8NHX9 752 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 PTPRN2Q92932 1015 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 EPB41L4AQ9HCS5 686 aaPredicted RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 DAGLAQ9Y4D2 1042 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 LRRIQ3A6PVS8 624 aaPredicted RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 VHLP40337 213 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 CDC42EP1Q00587 391 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 GANCQ8TET4 914 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 PNKPQ96T60 521 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 PABPC3Q9H361 631 aaKnown RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 ADCY3O60266 1144 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 H2AFXP16104 143 aaPredicted RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 GEMIN4P57678 1058 aaKnown RBP13.74□□□□□ -0.21
TNC-212ENST00000542877 VPS33BQ9H267 617 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 TBC1D23Q9NUY8 699 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 ARHGEF38Q9NXL2 777 aa13.74□□□□□ -0.21
TNC-212ENST00000542877 HNRNPRO43390 633 aaKnown RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 ITIH4Q14624 930 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 KRT72Q14CN4 511 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 ANO4Q32M45 955 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 APLFQ8IW19 511 aaPredicted RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 ELMOD1Q8N336 334 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 PPP1R36Q96LQ0 422 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 AGAP3Q96P47 875 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 NOD2Q9HC29 1040 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 HPS5Q9UPZ3 1129 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 POLBP06746 335 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 ACADSP16219 412 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 RRM2BQ7LG56 351 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 SLC13A5Q86YT5 568 aaPredicted RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 CASKIN2Q8WXE0 1202 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 OTUB1Q96FW1 271 aaPredicted RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 GTF3C4Q9UKN8 822 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 TLR2O60603 784 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 NDUFB10O96000 172 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 HLA-DRAP01903 254 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 PDHBP11177 359 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 HLA-DPA1P20036 260 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 KCNJ1P48048 391 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 ERFP50548 548 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 SYCP2LQ5T4T6 812 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 DAGLBQ8NCG7 672 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 RIT2Q99578 217 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 MOV10L1Q9BXT6 1211 aaKnown RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 LOC102724159A0A0B4J2E5 919 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 SUPT3HO75486 399 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 ERVK-24P63145 666 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 PWP2Q15269 919 aaKnown RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 ZC2HC1CQ53FD0 456 aaPredicted RBP13.73□□□□□ -0.21
TNC-212ENST00000542877 TAGAPQ8N103 731 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 FEZF2Q8TBJ5 459 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 LPAR1Q92633 364 aa13.73□□□□□ -0.21
TNC-212ENST00000542877 AIM2O14862 343 aa13.72□□□□□ -0.21
TNC-212ENST00000542877 TBC1D4O60343 1298 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms