RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 LPXNO60711 386 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 B3GAT3O94766 335 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 NOL4O94818 638 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 PON1P27169 355 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 MYL7Q01449 175 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 PLCB3Q01970 1234 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 BIRC3Q13489 604 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 RAB30Q15771 203 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 PHLDB3Q6NSJ2 640 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 USP37Q86T82 979 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 EHBP1Q8NDI1 1231 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 FBXL13Q8NEE6 735 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 SPPL3Q8TCT6 385 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 HPDLQ96IR7 371 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 ZNF558Q96NG5 402 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 TTYH1Q9H313 450 aaPredicted RBP11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 CHST7Q9NS84 486 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 GDAP2Q9NXN4 497 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 ADAM28Q9UKQ2 775 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 POLIQ9UNA4 740 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 VWA8A3KMH1 1905 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 TULP1O00294 542 aaPredicted RBP11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 TBC1D4O60343 1298 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 LILRB3O75022 631 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 FGF18O76093 207 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 FGFR3P22607 806 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 ASPAP45381 313 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 ALDH7A1P49419 539 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 MRPL58Q14197 206 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 SOWAHAQ2M3V2 549 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 SGSM1Q2NKQ1 1148 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 RTP2Q5QGT7 225 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 TRIM65Q6PJ69 517 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 SARM1Q6SZW1 724 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 OSTM1Q86WC4 334 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 ARHGEF19Q8IW93 802 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 UBR7Q8N806 425 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 KBTBD7Q8WVZ9 684 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 KAT5Q92993 513 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 TIFAQ96CG3 184 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 SUSD3Q96L08 255 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 B3GALT6Q96L58 329 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 ERGIC2Q96RQ1 377 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 TGS1Q96RS0 853 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 RTP3Q9BQQ7 232 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 PLVAPQ9BX97 442 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 NAA15Q9BXJ9 866 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 BCO2Q9BYV7 579 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 INTS2Q9H0H0 1204 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 CERS4Q9HA82 394 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 SPG21Q9NZD8 308 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 L1RE1Q9UN81 338 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 NLRC5Q86WI3 1866 aa11.48□□□□□ -0.57
NPIPB3-210ENST00000542817 PLXNA4Q9HCM2 1894 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 GOLGA6L3A6NEY3 463 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 KPNA7A9QM74 516 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 GOLGA6L19H0YKK7 550 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 RFXAPO00287 272 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 GRM6O15303 877 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 HCRTO43612 131 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 N4BP1O75113 896 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 CYP11A1P05108 521 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 KRT19P08727 400 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 ACO1P21399 889 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 TKTP29401 623 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 ATICP31939 592 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 CTNNB1P35222 781 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 PNPLA4P41247 253 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 PIK3CAP42336 1068 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 TAF6P49848 677 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 MRE11P49959 708 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 KIAA0319Q5VV43 1072 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 FUT10Q6P4F1 479 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 GJB7Q6PEY0 223 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 RSPO2Q6UXX9 243 aaPredicted RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 DDX53Q86TM3 631 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 TAF4BQ92750 862 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 SENP8Q96LD8 212 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 KREMEN1Q96MU8 473 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 ARID3AQ99856 593 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 MRPL45Q9BRJ2 306 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 COLEC11Q9BWP8 271 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 XPO4Q9C0E2 1151 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 GANQ9H2C0 597 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 SMYD3Q9H7B4 428 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 ALG13Q9NP73 1137 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 RRAGDQ9NQL2 400 aaPredicted RBP11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 IFNKQ9P0W0 207 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 MSRAQ9UJ68 235 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 MTUS1Q9ULD2 1270 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 MYO9BQ13459 2157 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 C5orf42Q9H799 3197 aa11.47□□□□□ -0.57
NPIPB3-210ENST00000542817 TSC2P49815 1807 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 H3BNC9 293 aa11.46□□□□□ -0.57
NPIPB3-210ENST00000542817 RNF225M0QZC1 329 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms