RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 C2CD6Q53TS8 623 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 IQCKQ8N0W5 287 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 C1orf127Q8N9H9 656 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 OR6J1Q8NGC5 347 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 CCDC102AQ96A19 550 aa15.11■□□□□ 0.01
LDB3-207ENST00000542786 RPF1Q9H9Y2 349 aaKnown RBP15.11■□□□□ 0.01
LDB3-207ENST00000542786 LACTBL1A8MY62 500 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 THAP12O43422 761 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 SPOPO43791 374 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 TSPAN1O60635 241 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 PHF2O75151 1096 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 LSM8O95777 96 aaKnown RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 IGHA2P01877 340 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 TNNC2P02585 160 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 TMEM191BP0C7N4 346 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 MMP8P22894 467 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 SSTR3P32745 418 aaPredicted RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 ZNF699Q32M78 642 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 ALS2CLQ60I27 953 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 MMS22LQ6ZRQ5 1243 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 DDX42Q86XP3 938 aaKnown RBP eCLIP15.1■□□□□ 0.01
LDB3-207ENST00000542786 SLC13A5Q86YT5 568 aaPredicted RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 RIN2Q8WYP3 895 aaPredicted RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 TFAP2BQ92481 460 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 USP6NLQ92738 828 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 CPB2Q96IY4 423 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 C11orf70Q9BRQ4 267 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 POLIQ9UNA4 740 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 GNEQ9Y223 722 aaKnown RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 AKT3Q9Y243 479 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 GOLGA6BA6NDN3 693 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 IGF2BP3O00425 579 aaKnown RBP eCLIP15.1■□□□□ 0.01
LDB3-207ENST00000542786 PROSCO94903 275 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 ITGBL1O95965 494 aaPredicted RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 SLC10A6Q3KNW5 377 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 DUPD1Q68J44 220 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 PPP1R2P3Q6NXS1 205 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 TTC27Q6P3X3 843 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 MAATS1Q7Z4T9 603 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 RASAL3Q86YV0 1011 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 CCDC26Q8TAB7 109 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 DDX27Q96GQ7 796 aaKnown RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 FAXDC2Q96IV6 333 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 ANKRD36BP1Q96IX9 119 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 PPP1R16BQ96T49 567 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 TRIM51Q9BSJ1 452 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 SDCBP2Q9H190 292 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 ADAMTS10Q9H324 1103 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 ADAM22Q9P0K1 906 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 ZHX1Q9UKY1 873 aaPredicted RBP15.1■□□□□ 0.01
LDB3-207ENST00000542786 PCDHGC3Q9UN70 934 aa15.1■□□□□ 0.01
LDB3-207ENST00000542786 FAM187AA6NFU0 413 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 A6NJR5 290 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 DAPK3O43293 454 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 ZEB2O60315 1214 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 RNF40O75150 1001 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 WEE2P0C1S8 567 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 BRD2P25440 801 aaKnown RBP15.09■□□□□ 0.01
LDB3-207ENST00000542786 SLC1A1P43005 524 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 RWDD2BP57060 319 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 TRPC3Q13507 836 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 DGKDQ16760 1214 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 KCTD19Q17RG1 926 aaPredicted RBP15.09■□□□□ 0.01
LDB3-207ENST00000542786 LIN9Q5TKA1 542 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 JADE1Q6IE81 842 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 ADAT2Q7Z6V5 191 aaKnown RBP15.09■□□□□ 0.01
LDB3-207ENST00000542786 PHLDB2Q86SQ0 1253 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 ZNF410Q86VK4 478 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 WDTC1Q8N5D0 677 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 C12orf50Q8NA57 414 aaPredicted RBP15.09■□□□□ 0.01
LDB3-207ENST00000542786 KAT2BQ92831 832 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 VRTNQ9H8Y1 702 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 FLRT1Q9NZU1 646 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 VPS18Q9P253 973 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 PCYOX1Q9UHG3 505 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 CPA4Q9UI42 421 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 ADAM21Q9UKJ8 722 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
LDB3-207ENST00000542786 GOLGA6L10A0A0M3HER8 536 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 A0A1B0GUA9 196 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 FSCN2O14926 492 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 F2P00734 622 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 CD58P19256 250 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 TMOD1P28289 359 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 GUCY2FP51841 1108 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 MAP2K5Q13163 448 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 DHX34Q14147 1143 aaKnown RBP15.08■□□□□ 0.01
LDB3-207ENST00000542786 HSP90B2PQ58FF3 399 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 EXOC4Q96A65 974 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 HERPUD2Q9BSE4 406 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 ASB7Q9H672 318 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 PSD3Q9NYI0 1048 aa15.08■□□□□ 0.01
LDB3-207ENST00000542786 ZNF865P0CJ78 1059 aaPredicted RBP15.08■□□□□ 0
LDB3-207ENST00000542786 RARAP10276 462 aa15.08■□□□□ 0
LDB3-207ENST00000542786 CHRNA3P32297 505 aa15.08■□□□□ 0
LDB3-207ENST00000542786 CYP2C19P33261 490 aa15.08■□□□□ 0
LDB3-207ENST00000542786 MAN1A1P33908 653 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms