RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 FMR1NBQ8N0W7 255 aaPredicted RBP16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 KIAA0895Q8NCT3 520 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 ZNF461Q8TAF7 563 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 CXorf38Q8TB03 319 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 TMEM174Q8WUU8 243 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 KIAA1586Q9HCI6 787 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 PDE11AQ9HCR9 933 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 WDR6Q9NNW5 1121 aaKnown RBP16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 EXOC1Q9NV70 894 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 CGNQ9P2M7 1197 aaKnown RBP16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 CIZ1Q9ULV3 898 aaPredicted RBP16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 NR2E1Q9Y466 385 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 TSC2P49815 1807 aa16.72■□□□□ 0.27
ECHDC2-223ENST00000542552 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 ZNF233A6NK53 670 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 DCXO43602 365 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 RPN1P04843 607 aaKnown RBP16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 POU2F2P09086 479 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 ALADP13716 330 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 TYMPP19971 482 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 CTXN3Q4LDR2 81 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 DSTYKQ6XUX3 929 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 CBWD2Q8IUF1 395 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 ENGASEQ8NFI3 743 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 SMG7Q92540 1137 aaKnown RBP16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
ECHDC2-223ENST00000542552 C2CD4DB7Z1M9 353 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 RHOBTB3O94955 611 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 CYP11A1P05108 521 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 C8AP07357 584 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 TFAMQ00059 246 aaKnown RBP16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 YWHAHQ04917 246 aaPredicted RBP16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 LIN9Q5TKA1 542 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 ZNF280DQ6N043 979 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 CCDC149Q6ZUS6 474 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 HS2ST1Q7LGA3 356 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 ZDHHC14Q8IZN3 488 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 C1orf127Q8N9H9 656 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 CACTINQ8WUQ7 758 aaKnown RBP16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 TSHZ2Q9NRE2 1034 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 MUTYHQ9UIF7 546 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 TIMM13Q9Y5L4 95 aaPredicted RBP16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 DOCK6Q96HP0 2047 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 PTPRJQ12913 1337 aa16.7■□□□□ 0.26
ECHDC2-223ENST00000542552 ARHGEF37A1IGU5 675 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 CLIC2O15247 247 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 ATF2P15336 505 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 TAF6P49848 677 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 SURF1Q15526 300 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 PPM1LQ5SGD2 360 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 SCARA3Q6AZY7 606 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 TCEAL8Q8IYN2 117 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 XXYLT1Q8NBI6 393 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 GOLGA5Q8TBA6 731 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 SLC7A14Q8TBB6 771 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 FAM84AQ96KN4 292 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 C1QTNF1Q9BXJ1 281 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 KCTD10Q9H3F6 313 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 C11orf16Q9NQ32 467 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 DMAC2Q9NW81 257 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 MAFFQ9ULX9 164 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 CLUHO75153 1309 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 NOTCH4Q99466 2003 aa16.69■□□□□ 0.26
ECHDC2-223ENST00000542552 DOCK8Q8NF50 2099 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 MYO10Q9HD67 2058 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 N4BP1O75113 896 aaKnown RBP16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 SEC24AO95486 1093 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 ITGB3P05106 788 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 ODC1P11926 461 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 SP100P23497 879 aaPredicted RBP16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 PNPLA4P41247 253 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 CYP2J2P51589 502 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 KCNB1Q14721 858 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 OVOS1Q6IE37 1185 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 OTOP3Q7RTS5 596 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 USP37Q86T82 979 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 SLC9A9Q8IVB4 645 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 TDRD5Q8NAT2 981 aaKnown RBP16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 OR5B17Q8NGF7 314 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 NOC3LQ8WTT2 800 aaKnown RBP16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 MFSD14AQ96MC6 490 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 AFF4Q9UHB7 1163 aaKnown RBP16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 SIX4Q9UIU6 781 aa16.68■□□□□ 0.26
ECHDC2-223ENST00000542552 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 OR6C75A6NL08 312 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 PDXKO00764 312 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 CYB561D2O14569 222 aa16.67■□□□□ 0.26
ECHDC2-223ENST00000542552 GPR37L1O60883 481 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms