RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 PCDHA1Q9Y5I3 950 aa5.42□□□□□ -1.54
C2CD3-218ENST00000542484 VPS8Q8N3P4 1428 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 AHRRA9YTQ3 701 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 PLSCR1O15162 318 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 PHGDHO43175 533 aaKnown RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 FRS3O43559 492 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 CAND2O75155 1236 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 AGFG2O95081 481 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 AHSGP02765 367 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 GJB1P08034 283 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 RARBP10826 455 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 CKBP12277 381 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 CACNB3P54284 484 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 RNASE9P60153 205 aaKnown RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 FAM193AP78312 1265 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 CNN3Q15417 329 aaKnown RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 RNF207Q6ZRF8 634 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 OR56A1Q8NGH5 318 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 CPT1CQ8TCG5 803 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 ANP32BQ92688 251 aaKnown RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 TNPO1Q92973 898 aaKnown RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 SCAMP4Q969E2 229 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 MRGPRX1Q96LB2 322 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 NT5C1BQ96P26 610 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 SLC46A2Q9BY10 475 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 C22orf23Q9BZE7 217 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 ZMAT3Q9HA38 289 aaKnown RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 ATP6V0A4Q9HBG4 840 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 GPR35Q9HC97 309 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 SARS2Q9NP81 518 aaKnown RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 PARPBPQ9NWS1 579 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 STAP2Q9UGK3 403 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 SLC45A2Q9UMX9 530 aa5.41□□□□□ -1.54
C2CD3-218ENST00000542484 USP15Q9Y4E8 981 aaPredicted RBP5.41□□□□□ -1.54
C2CD3-218ENST00000542484 GAGE12BA1L429 117 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 GAGE12HA6NDE8 117 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 ZNF185O15231 689 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 SCAF4O95104 1147 aaKnown RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 SPATA31D3P0C874 917 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 NOMO3P69849 1222 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 PURAQ00577 322 aaKnown RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 DMTNQ08495 405 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 PDCD4Q53EL6 469 aaKnown RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 NOMO2Q5JPE7 1267 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 KHDC1LQ5JSQ8 128 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 SPATA31D4Q6ZUB0 917 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 CCDC149Q6ZUS6 474 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 NOL8Q76FK4 1167 aaKnown RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 COL23A1Q86Y22 540 aaPredicted RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 CELF5Q8N6W0 485 aaKnown RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 TMIEQ8NEW7 156 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 KLHL32Q96NJ5 620 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 SARGQ9BW04 601 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 RNPEPQ9H4A4 650 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 SLAMF7Q9NQ25 335 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 CNNM1Q9NRU3 951 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 TRPM5Q9NZQ8 1165 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 ISY1Q9ULR0 285 aaKnown RBP5.4□□□□□ -1.54
C2CD3-218ENST00000542484 ATP11BQ9Y2G3 1177 aa5.4□□□□□ -1.54
C2CD3-218ENST00000542484 WDR97A6NE52 1622 aa5.4□□□□□ -1.55
C2CD3-218ENST00000542484 A0A1W2PPL8 197 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 GOLGA6L3A6NEY3 463 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 MARCH11A6NNE9 402 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 B8ZZF3 427 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 GOLIM4O00461 696 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 RPS6KA4O75676 772 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 KIF20AO95235 890 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 CHEK2O96017 543 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 ADRB1P08588 477 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 FCER1AP12319 257 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 TRIM27P14373 513 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 NPR1P16066 1061 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 SOX8P57073 446 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 SLC25A3Q00325 362 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 OCA2Q04671 838 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 EXOSC9Q06265 439 aaKnown RBP5.39□□□□□ -1.55
C2CD3-218ENST00000542484 SEMA5AQ13591 1074 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 NRN1LQ496H8 165 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 RNF220Q5VTB9 566 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 TSHZ3Q63HK5 1081 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 DARS2Q6PI48 645 aaKnown RBP5.39□□□□□ -1.55
C2CD3-218ENST00000542484 APOA5Q6Q788 366 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 LRRC55Q6ZSA7 311 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 IL31RAQ8NI17 732 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 CACTINQ8WUQ7 758 aaKnown RBP5.39□□□□□ -1.55
C2CD3-218ENST00000542484 ANKS1AQ92625 1134 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 TRIM44Q96DX7 344 aaPredicted RBP5.39□□□□□ -1.55
C2CD3-218ENST00000542484 PNKPQ96T60 521 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 BHMT2Q9H2M3 363 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 PIH1D1Q9NWS0 290 aaKnown RBP5.39□□□□□ -1.55
C2CD3-218ENST00000542484 PCDHA6Q9UN73 950 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 MED16Q9Y2X0 877 aa5.39□□□□□ -1.55
C2CD3-218ENST00000542484 MAPKBP1O60336 1514 aa5.38□□□□□ -1.55
C2CD3-218ENST00000542484 A0A1B0GTW7 788 aa5.38□□□□□ -1.55
C2CD3-218ENST00000542484 CFAP69A5D8W1 941 aa5.38□□□□□ -1.55
C2CD3-218ENST00000542484 ZNF785A8K8V0 405 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms