RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	MIF4GD	A9UHW6	222 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	RTN2	O75298	545 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ATIC	P31939	592 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	PMS1	P54277	932 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	APBA1	Q02410	837 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	DHX9	Q08211	1270 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	MAPRE1	Q15691	268 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZNF792	Q3KQV3	632 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	GPAT2	Q6NUI2	795 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	VSIG1	Q86XK7	387 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	BBS5	Q8N3I7	341 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	RNF10	Q8N5U6	811 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	BCAS4	Q8TDM0	211 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	PPP1R13L	Q8WUF5	828 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	C18orf8	Q96DM3	657 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	RUNDC3B	Q96NL0	473 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	YME1L1	Q96TA2	773 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	DUSP9	Q99956	384 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ADAM2	Q99965	735 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	PHB	P35232	272 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	TAP1	Q03518	808 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	C4orf50	Q6ZRC1	276 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	KCTD6	Q8NC69	237 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	NPLOC4	Q8TAT6	608 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	CCDC110	Q8TBZ0	833 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	CAPS2	Q9BXY5	557 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	PIDD1	Q9HB75	910 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	DONSON	Q9NYP3	566 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	CPSF3	Q9UKF6	684 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	BUB1B	O60566	1050 aa	Predicted RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	RWDD2B	P57060	319 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	PSMD6	Q15008	389 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZNF677	Q86XU0	584 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	TC2N	Q8N9U0	490 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	TAS1R2	Q8TE23	839 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	SEPT10	Q9P0V9	454 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	USP20	Q9Y2K6	914 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ANKRD63	C9JTQ0	380 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	PON1	P27169	355 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ELAVL2	Q12926	359 aa	Known RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	CASP8	Q14790	479 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	SLC18A3	Q16572	532 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	CCDC13	Q8IYE1	715 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	SYN2	Q92777	582 aa	Predicted RBP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	RSAD1	Q9HA92	442 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	ITGA11	Q9UKX5	1188 aa		13.11	□□□□□ -0.31
ABCB8-222	ENST00000542328	MOXD2P	A6NHM9	499 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	NCK2	O43639	380 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	GRIK1	P39086	918 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	PAN2	Q504Q3	1202 aa	Known RBP	13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	NECAB2	Q7Z6G3	386 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	USP38	Q8NB14	1042 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	RFFL	Q8WZ73	363 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	LENG9	Q96B70	501 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	POP1	Q99575	1024 aa	Known RBP	13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	CYP3A43	Q9HB55	503 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	EHD2	Q9NZN4	543 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	KIAA1257	Q9ULG3	409 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328		Q9Y3F1	56 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	MAD1L1	Q9Y6D9	718 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	ZNF862	O60290	1169 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	CASP5	P51878	434 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	TRIP13	Q15645	432 aa	Predicted RBP	13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	GEN1	Q17RS7	908 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	ARSH	Q5FYA8	562 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	PARD3B	Q8TEW8	1205 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	DHX38	Q92620	1227 aa	Known RBP	13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	NUP85	Q9BW27	656 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	FAN1	Q9Y2M0	1017 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	SBF2	Q86WG5	1849 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	NCKAP1L	P55160	1127 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	IKBKE	Q14164	716 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	NCAPH	Q15003	741 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	FIGN	Q5HY92	759 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	BTBD8	Q5XKL5	378 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	TTC19	Q6DKK2	380 aa	Predicted RBP	13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	MRPL9	Q9BYD2	267 aa	Known RBP	13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	PARVA	Q9NVD7	372 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	IP6K2	Q9UHH9	426 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	AKAP11	Q9UKA4	1901 aa		13.1	□□□□□ -0.31
ABCB8-222	ENST00000542328	POC1B-GALNT4	F8VUJ3	575 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	GYPC	P04921	128 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	AKAP5	P24588	427 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	KCNA1	Q09470	495 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	KIAA0319L	Q8IZA0	1049 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	FTHL17	Q9BXU8	183 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	SEZ6L	Q9BYH1	1024 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	EPC1	Q9H2F5	836 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	DHX33	Q9H6R0	707 aa	Known RBP	13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	FAM49B	Q9NUQ9	324 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	NFU1	Q9UMS0	254 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	CCDC188	H7C350	402 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	CYB561D2	O14569	222 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	ADAMTS3	O15072	1205 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	ALDH2	P05091	517 aa		13.09	□□□□□ -0.31
ABCB8-222	ENST00000542328	MYL6	P60660	151 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms