RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CLDN3O15551 220 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 SMIM24O75264 130 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 ARIH2O95376 493 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 FESP07332 822 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 CYP3A4P08684 503 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 T-ENOLP0DO92 83 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 TNFAIP3P21580 790 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 PPP1R15BQ5SWA1 713 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 PRAMEF19Q5SWL8 479 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 PHLDB3Q6NSJ2 640 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 SWSAP1Q6NVH7 229 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 SLC30A9Q6PML9 568 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 GBP7Q8N8V2 638 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 LENG1Q96BZ8 264 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 NUDCD1Q96RS6 583 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 NAP1L3Q99457 506 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 GLT8D2Q9H1C3 349 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 CHST7Q9NS84 486 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 GRID1Q9ULK0 1009 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 DNM3Q9UQ16 869 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 LRRC42Q9Y546 428 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 COL11A1P12107 1806 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 PDXKO00764 312 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 CALUO43852 315 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 ITGBL1O95965 494 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 FTLP02792 175 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 CALB2P22676 271 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 PTDSS1P48651 473 aaKnown RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 FMO5P49326 533 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 CYP2J2P51589 502 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 MXRA7P84157 204 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 KRT17Q04695 432 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 MTFR1Q15390 333 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 FOXB2Q5VYV0 432 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 VSIG10LQ86VR7 867 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 FAM186BQ8IYM0 893 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 STK32AQ8WU08 396 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 TEKT4Q8WW24 435 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 SLC5A5Q92911 643 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 SLC7A6OSQ96CW6 309 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 PPP1R16BQ96T49 567 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 PCDHB18PQ96TA0 734 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 TSC22D3Q99576 134 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 TEKT3Q9BXF9 490 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 TBC1D10AQ9BXI6 508 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 STK33Q9BYT3 514 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 INTS2Q9H0H0 1204 aaKnown RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 DENND2DQ9H6A0 471 aaPredicted RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 PAPOLBQ9NRJ5 636 aaKnown RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 TYW1Q9NV66 732 aaKnown RBP9.7□□□□□ -0.86
THBS3-211ENST00000541990 RABGAP1Q9Y3P9 1069 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 UBIAD1Q9Y5Z9 338 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 FRMPD4Q14CM0 1322 aa9.7□□□□□ -0.86
THBS3-211ENST00000541990 ANKRD62A6NC57 917 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 AHCYL1O43865 530 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 RPA1P27694 616 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 PAPOLAP51003 745 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 PPIL2Q13356 520 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 SNAPC2Q13487 334 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 DAB2IPQ5VWQ8 1189 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 RNF43Q68DV7 783 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 CWF19L1Q69YN2 538 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 TMEM154Q6P9G4 183 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 VSIG1Q86XK7 387 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 SLC13A5Q86YT5 568 aaPredicted RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 NSUN6Q8TEA1 469 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 C9orf72Q96LT7 481 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 FAM20AQ96MK3 541 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 STMN4Q9H169 189 aaPredicted RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 METTL5Q9NRN9 209 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.69□□□□□ -0.86
THBS3-211ENST00000541990 C2CD2Q9Y426 696 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 DOCK1Q14185 1865 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 PODXLO00592 558 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 LUC7L3O95232 432 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 FGFR1P11362 822 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 SP100P23497 879 aaPredicted RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 ANXA13P27216 316 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 PCNX4Q63HM2 1172 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 RINT1Q6NUQ1 792 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 INTS8Q75QN2 995 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 ARHGEF19Q8IW93 802 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 C2orf69Q8N8R5 385 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 ZSWIM2Q8NEG5 633 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 ASAP3Q8TDY4 903 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 FBF1Q8TES7 1133 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 PITPNM3Q9BZ71 974 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 LRMDAQ9H2I8 198 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 NINJ2Q9NZG7 142 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 DLGAP2Q9P1A6 1054 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 GABBR1Q9UBS5 961 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 ASIC3Q9UHC3 531 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 TCEAL9Q9UHQ7 104 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 NAALADL1Q9UQQ1 740 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 DIS3Q9Y2L1 958 aaKnown RBP9.69□□□□□ -0.86
THBS3-211ENST00000541990 ATP8B3O60423 1300 aa9.69□□□□□ -0.86
THBS3-211ENST00000541990 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms