RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 XPO7Q9UIA9 1087 aaKnown RBP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 CRLS1Q9UJA2 301 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 C4BPBP20851 252 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 USP11P51784 963 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 E2F4Q16254 413 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 NT5DC4Q86YG4 428 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 GTF3C2Q8WUA4 911 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 KCNK16Q96T55 309 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 CD209Q9NNX6 404 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 SLC25A13Q9UJS0 675 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 SNTNA6NMZ2 147 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 SCP2P22307 547 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 FGFR4P22455 802 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 MCAMP43121 646 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 RGS7P49802 495 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 CINPQ9BW66 212 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 RPRD1BQ9NQG5 326 aaKnown RBP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 ZC3H7BQ9UGR2 993 aaKnown RBP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 TCOF1Q13428 1488 aaKnown RBP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 RHOBTB1O94844 696 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 TRIM49P0CI25 452 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 TRIM49CP0CI26 452 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 CDC27P30260 824 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 SGO1Q5FBB7 561 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 GLB1LQ6UWU2 654 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 SPATA21Q7Z572 469 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 EME1Q96AY2 570 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 TUBGCP3Q96CW5 907 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
GABRB3-204ENST00000541819 SYBUQ9NX95 663 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
GABRB3-204ENST00000541819 ZFYVE16Q7Z3T8 1539 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 ABCA5Q8WWZ7 1642 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 CYP26A1O43174 497 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 IL18RAPO95256 599 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 VCLP18206 1134 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 CLK1P49759 484 aaKnown RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 CSTF3Q12996 717 aaKnown RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 ALFQ53S48 1182 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 SH3GL2Q99962 352 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 GTF2A1LQ9UNN4 478 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 VWA5AO00534 786 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 EYA4O95677 639 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 C6orf222P0C671 652 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 PNMA6AP0CW24 399 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 SPRP35270 261 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 RCAN1P53805 252 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 FAM117BQ6P1L5 589 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 APPL1Q9UKG1 709 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 VPS9D1Q9Y2B5 631 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 F5H6K3 240 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 RNF103O00237 685 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 CHRM3P20309 590 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 PCSK1P29120 753 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 KLRC3Q07444 240 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 TXNRD1Q16881 649 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 LMBRD2Q68DH5 695 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 JADE3Q92613 823 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 SLC39A10Q9ULF5 831 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 SESN1Q9Y6P5 492 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 APRTP07741 180 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 OR1G1P47890 313 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 NPEPPSP55786 919 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 PDK1Q15118 436 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 TDRD10Q5VZ19 366 aaKnown RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 ZNF544Q6NX49 715 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 PIGBQ92521 554 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 C19orf60Q96EN9 201 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 POLD4Q9HCU8 107 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 TBC1D23Q9NUY8 699 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 WWOXQ9NZC7 414 aa11.23□□□□□ -0.61
GABRB3-204ENST00000541819 NPHP4O75161 1426 aaPredicted RBP11.23□□□□□ -0.61
GABRB3-204ENST00000541819 POU4F1Q01851 419 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 SNAPC2Q13487 334 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PIGHQ14442 188 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 SGSM1Q2NKQ1 1148 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 TTLL9Q3SXZ7 439 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 IRAK1BP1Q5VVH5 260 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 TRAF7Q6Q0C0 670 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 UCMAQ8WVF2 138 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 PSMC3IPQ9P2W1 217 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 M0R3G1 203 aa11.22□□□□□ -0.61
GABRB3-204ENST00000541819 DYNC1LI2O43237 492 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-204ENST00000541819 KLHL2O95198 593 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms