RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 NSUN7Q8NE18 718 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 PTPRN2Q92932 1015 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 JSRP1Q96MG2 331 aaPredicted RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 EMILIN2Q9BXX0 1053 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 EPN3Q9H201 632 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 TLR8Q9NR97 1041 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 TXLNGQ9NUQ3 528 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 TRPC4Q9UBN4 977 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 PPP2R2CQ9Y2T4 447 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 LINC00854A0A1B0GVQ3 168 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 TRIM49BA6NDI0 452 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 PFDN1O60925 122 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 RHOBTB1O94844 696 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 PARNO95453 639 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 LMNAP02545 664 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 P4HBP07237 508 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 GHRP10912 638 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 GCKP35557 465 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 NME5P56597 212 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 ACAP2Q15057 778 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 IYDQ6PHW0 289 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 GPD1LQ8N335 351 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 C1orf54Q8WWF1 131 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 FAM162AQ96A26 154 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 SERPINI1Q99574 410 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 WWOXQ9NZC7 414 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 GPSM3Q9Y4H4 160 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 PCDHA10Q9Y5I2 948 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 ADM5C9JUS6 153 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 KPNA3O00505 521 aaPredicted RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 SCAMP1O15126 338 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 ALDH2P05091 517 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 RPS6P62753 249 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 SPATA1Q5VX52 437 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 TMEM154Q6P9G4 183 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 NLRP9Q7RTR0 991 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 B3GALNT2Q8NCR0 500 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 IQCDQ96DY2 449 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 TMA16Q96EY4 203 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 ZNF556Q9HAH1 456 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 EXOSC4Q9NPD3 245 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 IMPACTQ9P2X3 320 aa6.62□□□□□ -1.35
DMD-228ENST00000541735 ZMYND8Q9ULU4 1186 aaPredicted RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 APOBEC2Q9Y235 224 aaKnown RBP6.62□□□□□ -1.35
DMD-228ENST00000541735 STAU1O95793 577 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 NR3C1P04150 777 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 UMPSP11172 480 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 SLC11A2P49281 568 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ARMCX6Q7L4S7 300 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 GATAD2AQ86YP4 633 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 UXS1Q8NBZ7 420 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 OSBP2Q969R2 916 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 CGRRF1Q99675 332 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 KIFC3Q9BVG8 833 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 TEX13BQ9BXU2 312 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 CAPS2Q9BXY5 557 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 NHEJ1Q9H9Q4 299 aaPredicted RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 SNX24Q9Y343 169 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 C3orf70A6NLC5 250 aaPredicted RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 KPNA7A9QM74 516 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ZW10O43264 779 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ACSL4O60488 711 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 CPSF4O95639 269 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 HLA-DQA2P01906 255 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 PYGBP11216 843 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 PTPN7P35236 360 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 GRK3P35626 688 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 PEX5P50542 639 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ARL4CP56559 192 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 PDIA2Q13087 525 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 ZNF284Q2VY69 593 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 DEFB115Q30KQ5 88 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 GET4Q7L5D6 327 aaPredicted RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 ZBED8Q8IZ13 594 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 KCNS3Q9BQ31 491 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 SPZ1Q9BXG8 430 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 EIF2AQ9BY44 585 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 USP44Q9H0E7 712 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 BFARQ9NZS9 450 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 NOVA2Q9UNW9 492 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 BIVM-ERCC5R4GMW8 1640 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 SLC12A8A0AV02 714 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 SOWAHDA6NJG2 315 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 F5H5T6 163 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 H7C4K7 107 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 PDHXO00330 501 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 DGKIO75912 1065 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 APRTP07741 180 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 ODC1P11926 461 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 NMT1P30419 496 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 TCF7P36402 384 aaPredicted RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 CLK2P49760 499 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 PSEN2P49810 448 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 TUBB4BP68371 445 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 RASEFQ8IZ41 740 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 CEP70Q8NHQ1 597 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 COL26A1Q96A83 441 aa6.61□□□□□ -1.35
DMD-228ENST00000541735 UNKQ9C0B0 810 aaKnown RBP6.61□□□□□ -1.35
DMD-228ENST00000541735 MID2Q9UJV3 735 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms