RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MALLQ13021 153 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 CSRP2Q16527 193 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 TOGARAM2Q6ZUX3 1019 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 Q6ZVL8 140 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 ZNF627Q7L945 461 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 GDF7Q7Z4P5 450 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 SMAP1Q8IYB5 467 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-217ENST00000541578 CPXCR1Q8N123 301 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 FAM43AQ8N2R8 423 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 REPS2Q8NFH8 660 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 ZFP28Q8NHY6 868 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 PNISRQ8TF01 805 aaKnown RBP5.12□□□□□ -1.59
SNHG1-217ENST00000541578 HDAC10Q969S8 669 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 CHFRQ96EP1 664 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 CCDC138Q96M89 665 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 UHRF1Q96T88 793 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-217ENST00000541578 PRRX2Q99811 253 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 SLC46A2Q9BY10 475 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 PTPRHQ9HD43 1115 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 ARFGAP3Q9NP61 516 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 ERCC6L2Q5T890 1561 aa5.12□□□□□ -1.59
SNHG1-217ENST00000541578 CFAP69A5D8W1 941 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 RNASET2O00584 256 aaKnown RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 PJA2O43164 708 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 SUV39H1O43463 412 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 ZKSCAN1P17029 563 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 LAG3P18627 525 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 NR4A1P22736 598 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 PEX2P28328 305 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 IL12RB1P42701 662 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 RNASE9P60153 205 aaKnown RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 NOMO1Q15155 1222 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 PTPAQ15257 358 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 TIGD2Q4W5G0 525 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 INO80DQ53TQ3 878 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 LY6G5CQ5SRR4 150 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 RNF220Q5VTB9 566 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 RHOUQ7L0Q8 258 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 OVCH2Q7RTZ1 564 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 ZNF572Q7Z3I7 529 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 ZNF354CQ86Y25 554 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 SYT12Q8IV01 421 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 TRMT2AQ8IZ69 625 aaKnown RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 PQLC1Q8N2U9 271 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 RNF169Q8NCN4 708 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 MYRIPQ8NFW9 859 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 PPP1R35Q8TAP8 253 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 MTFMTQ96DP5 389 aaKnown RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 B3GNT5Q9BYG0 378 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 NUP62CLQ9H1M0 184 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 TMEM60Q9H2L4 133 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 IKZF4Q9H2S9 585 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 ZNF768Q9H5H4 540 aaKnown RBP5.11□□□□□ -1.59
SNHG1-217ENST00000541578 SLITRK6Q9H5Y7 841 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 DMRT3Q9NQL9 472 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 TUBD1Q9UJT1 453 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 LRCH1Q9Y2L9 728 aa5.11□□□□□ -1.59
SNHG1-217ENST00000541578 A0A087X1B8 175 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 GAGE12BA1L429 117 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 GAGE12HA6NDE8 117 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 TMEM191CA6NGB0 347 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 CCDC154A6NI56 674 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 CXorf49A8MYA2 514 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-217ENST00000541578 DIRC3C9JPN6 131 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 KDM6BO15054 1643 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 B3GALT2O43825 422 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 TUSC2O75896 110 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 ABHD16AO95870 558 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 FTLP02792 175 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-217ENST00000541578 HRGP04196 525 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 SNRPA1P09661 255 aaKnown RBP5.1□□□□□ -1.59
SNHG1-217ENST00000541578 IL2RBP14784 551 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 HTR1BP28222 390 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 SREBF1P36956 1147 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 CLRN1P58418 232 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 PPP3CAQ08209 521 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 PDCD2Q16342 344 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-217ENST00000541578 ANO6Q4KMQ2 910 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 FAM83BQ5T0W9 1011 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 MRGPRGQ86SM5 289 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 LDLRAD3Q86YD5 345 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 SLC35B2Q8TB61 432 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 PROKR1Q8TCW9 393 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 NRG4Q8WWG1 115 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 LRTOMTQ8WZ04 291 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 HERPUD2Q9BSE4 406 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 APOL5Q9BWW9 433 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 AKIP1Q9NQ31 210 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 SERPINB13Q9UIV8 391 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 RAD54L2Q9Y4B4 1467 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 SNX13Q9Y5W8 968 aa5.1□□□□□ -1.59
SNHG1-217ENST00000541578 ABCC10Q5T3U5 1492 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 ATRNL1Q5VV63 1379 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 RHPN2P1A8MT19 583 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 TBX3O15119 743 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 RAMP2O60895 175 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 SPATA31D3P0C874 917 aa5.09□□□□□ -1.59
SNHG1-217ENST00000541578 ALOX15P16050 662 aaPredicted RBP5.09□□□□□ -1.59
SNHG1-217ENST00000541578 ZFP36P26651 326 aaKnown RBP5.09□□□□□ -1.59
SNHG1-217ENST00000541578 FAM189BP81408 668 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms