RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 C10orf76Q5T2E6 689 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 ALKBH5Q6P6C2 394 aaKnown RBP9.3□□□□□ -0.92
THBS3-210ENST00000541576 PALB2Q86YC2 1186 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 GLYCTKQ8IVS8 523 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 SECISBP2LQ93073 1101 aaKnown RBP9.3□□□□□ -0.92
THBS3-210ENST00000541576 AGPAT1Q99943 283 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 NIF3L1Q9GZT8 377 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 XYLT2Q9H1B5 865 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 CXCL16Q9H2A7 254 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 AGO3Q9H9G7 860 aaKnown RBP9.3□□□□□ -0.92
THBS3-210ENST00000541576 CHST12Q9NRB3 414 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 SEPT11Q9NVA2 429 aaKnown RBP9.3□□□□□ -0.92
THBS3-210ENST00000541576 DERAQ9Y315 318 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 IPPQ9Y573 584 aa9.3□□□□□ -0.92
THBS3-210ENST00000541576 FAM170AA1A519 330 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 PJA2O43164 708 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 CAND2O75155 1236 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 CALCAP01258 141 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 GHRP10912 638 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 TNFAIP3P21580 790 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 PAK2Q13177 524 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 NAB2Q15742 525 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 FAM26DQ5JW98 314 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 SLC47A2Q86VL8 602 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 EPS8L1Q8TE68 723 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 TAF4BQ92750 862 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 DPP3Q9NY33 737 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 MYO1AQ9UBC5 1043 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 PARP2Q9UGN5 583 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 ITGA11Q9UKX5 1188 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 H3BQF6 201 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 ACO1P21399 889 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 CD52P31358 61 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 PDE6CP51160 858 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 ZNF618Q5T7W0 954 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 GOLGA6L1Q8N7Z2 621 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 SMG8Q8ND04 991 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 U2AF1L4Q8WU68 220 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 PARD6BQ9BYG5 372 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 SEZ6LQ9BYH1 1024 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 RNF39Q9H2S5 420 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 CNTN3Q9P232 1028 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 NOCTQ9UK39 431 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 PADI3Q9ULW8 664 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 PCDHB4Q9Y5E5 795 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 RALGAPA2Q2PPJ7 1873 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 CYP11B1P15538 503 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 CHRNB2P17787 502 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 POLR2BP30876 1174 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 ATICP31939 592 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 GUCY2FP51841 1108 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 RBP5P82980 135 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 LPIN1Q14693 890 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 ZNF667Q5HYK9 610 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 GLRA4Q5JXX5 417 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 TMEM270Q6UE05 265 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 ALKAL1Q6UXT8 129 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 RPUSD2Q8IZ73 545 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 CXorf38Q8TB03 319 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 ZMAT2Q96NC0 199 aaKnown RBP9.29□□□□□ -0.92
THBS3-210ENST00000541576 TSPYL1Q9H0U9 437 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 ERVK-5Q9HDB9 667 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 TAS2R14Q9NYV8 317 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 OGDHLQ9ULD0 1010 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 AGAP1Q9UPQ3 857 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 PCDHB2Q9Y5E7 798 aa9.29□□□□□ -0.92
THBS3-210ENST00000541576 CKBP12277 381 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 BPIFB4P59827 614 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 WDR72Q3MJ13 1102 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 CC2D1AQ6P1N0 951 aaPredicted RBP9.28□□□□□ -0.92
THBS3-210ENST00000541576 SCARA5Q6ZMJ2 495 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 DNAJC5GQ8N7S2 189 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 PCDHB18PQ96TA0 734 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 OSBPL7Q9BZF2 842 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 L2HGDHQ9H9P8 463 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 FAM105AQ9NUU6 356 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 KLK14Q9P0G3 267 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 NXF1Q9UBU9 619 aaKnown RBP9.28□□□□□ -0.92
THBS3-210ENST00000541576 TMCO5BA8MYB1 307 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 MOCS3O95396 460 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 ASPAP45381 313 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 SLC20A2Q08357 652 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 ZBTB6Q15916 424 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 HACE1Q8IYU2 909 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 USP38Q8NB14 1042 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 BEST2Q8NFU1 509 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 HPDLQ96IR7 371 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 UBQLN1Q9UMX0 589 aaKnown RBP9.28□□□□□ -0.92
THBS3-210ENST00000541576 FAN1Q9Y2M0 1017 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 SQORQ9Y6N5 450 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 CAPN6Q9Y6Q1 641 aa9.28□□□□□ -0.92
THBS3-210ENST00000541576 SMIM28A0A1B0GU29 152 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 H2AFZP0C0S5 128 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 CD58P19256 250 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 CDK7P50613 346 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 CDR2Q01850 454 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 TTC31Q49AM3 519 aaPredicted RBP9.27□□□□□ -0.92
THBS3-210ENST00000541576 XKR4Q5GH76 650 aa9.27□□□□□ -0.92
THBS3-210ENST00000541576 H2AFVQ71UI9 128 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms