RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 PDZD7Q9H5P4 517 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 C1orf112Q9NSG2 853 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 HAS3O00219 553 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 MEFVO15553 781 aaPredicted RBP16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 CYP26A1O43174 497 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 FAM187BQ17R55 369 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 KDM7AQ6ZMT4 941 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 IFNLR1Q8IU57 520 aaPredicted RBP16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 TRIP11Q15643 1979 aa16.34■□□□□ 0.21
CLPTM1-202ENST00000541297 TSPAN1O60635 241 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 CCND3P30281 292 aaPredicted RBP16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 APLP1P51693 650 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 TFAMQ00059 246 aaKnown RBP16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 CXCL17Q6UXB2 119 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 CCDC91Q7Z6B0 441 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 PALB2Q86YC2 1186 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 C7orf31Q8N865 590 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 OLIG1Q8TAK6 271 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 EPN3Q9H201 632 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 LUC7LQ9NQ29 371 aaKnown RBP16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 DAAM1Q9Y4D1 1078 aa16.33■□□□□ 0.21
CLPTM1-202ENST00000541297 CITO14578 2027 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 MBLAC1A4D2B0 266 aaPredicted RBP16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 H0YHG0 523 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 SGPL1O95470 568 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 CALCAP01258 141 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 CCDC172P0C7W6 258 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 TRADDQ15628 312 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 NAB2Q15742 525 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 WDR44Q5JSH3 913 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 NAA35Q5VZE5 725 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 SLC47A2Q86VL8 602 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 ADAMTS10Q9H324 1103 aa16.33■□□□□ 0.2
CLPTM1-202ENST00000541297 GPR32O75388 356 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 CST3P01034 146 aaPredicted RBP16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 KRT5P13647 590 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 ZNF410Q86VK4 478 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 WDR49Q8IV35 697 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 SHC3Q92529 594 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 KATNAL1Q9BW62 490 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 APOBEC3GQ9HC16 384 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 SMIM35A0A1B0GVV1 85 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 C17orf102A2RUQ5 167 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 STAG3L1P0CL83 205 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 PRKAR2AP13861 404 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 NR1D1P20393 614 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 SEC24CP53992 1094 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 RNASE9P60153 205 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 ADAM17P78536 824 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 PAK2Q13177 524 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 NCOA4Q13772 614 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 FAM71AQ8IYT1 594 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 ATXN2Q99700 1313 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 SEPT4O43236 478 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 FTCDO95954 541 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 RARBP10826 455 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 TNFAIP3P21580 790 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 GJA9P57773 515 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 RNF10Q8N5U6 811 aaKnown RBP16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 SLC30A5Q8TAD4 765 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 CASKIN2Q8WXE0 1202 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 KRT12Q99456 494 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 SYT11Q9BT88 431 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
CLPTM1-202ENST00000541297 PALMO75781 387 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 FSBPO95073 299 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 NOP9Q86U38 636 aaKnown RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 RPUSD2Q8IZ73 545 aaKnown RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 ZNF473Q8WTR7 871 aaKnown RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 GCOM2Q9BZD3 368 aaPredicted RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 ZC3H11AO75152 810 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 TMEM191BP0C7N4 346 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 GSCP56915 257 aaPredicted RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 GCNT1Q02742 428 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 PTGISQ16647 500 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 DUOXA2Q1HG44 320 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 CATSPER4Q7RTX7 472 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 SPATS2Q86XZ4 545 aaKnown RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 EPS8L1Q8TE68 723 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 TMEM40Q8WWA1 233 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 CABS1Q96KC9 395 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 PACSIN2Q9UNF0 486 aaPredicted RBP16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 NUB1Q9Y5A7 615 aa16.31■□□□□ 0.2
CLPTM1-202ENST00000541297 SCN10AQ9Y5Y9 1956 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 MCF2P10911 925 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 VEGFBP49765 207 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 PPARDQ03181 441 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 ZNF784Q8NCA9 323 aaPredicted RBP16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 VTI1AQ96AJ9 217 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 CCT8L2Q96SF2 557 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 SPC25Q9HBM1 224 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
CLPTM1-202ENST00000541297 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms