RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 R3HCC1Q9Y3T6 440 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 DYRK1BQ9Y463 629 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 NR2E3Q9Y5X4 410 aa7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 MKI67P46013 3256 aaKnown RBP7.18□□□□□ -1.26
CLTCL1-206ENST00000540896 ALPK3Q96L96 1907 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 MYH11P35749 1972 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 A0A1W2PRU2 124 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 LACTBL1A8MY62 500 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 AKR1B15C9JRZ8 316 aaPredicted RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 KIAA0355O15063 1070 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 P4HA2O15460 535 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 NRDCO43847 1150 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 IGHA1P01876 353 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 TNNC2P02585 160 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CXCL8P10145 99 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 RAG1P15918 1043 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 SYN1P17600 705 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 SLC9A1P19634 815 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CASP14P31944 242 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CYP2C18P33260 490 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 KLK7P49862 253 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 MXI1P50539 228 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 AP3M2P53677 418 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 FOXK2Q01167 660 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ENPEPQ07075 957 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 PPP3CAQ08209 521 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 RBL2Q08999 1139 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 TRIM14Q14142 442 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 DUOXA2Q1HG44 320 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CBWD6Q4V339 395 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CBWD3Q5JTY5 395 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CBWD5Q5RIA9 395 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 LMBRD2Q68DH5 695 aaPredicted RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 WDR49Q8IV35 697 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 BRSK2Q8IWQ3 736 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 RNF169Q8NCN4 708 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CCDC150Q8NCX0 1101 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 FBXL13Q8NEE6 735 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 PLEKHO2Q8TD55 490 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 IQCDQ96DY2 449 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ANKRD36BP1Q96IX9 119 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 CGRRF1Q99675 332 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ADAM2Q99965 735 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 IFIH1Q9BYX4 1025 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 PPP1R12CQ9BZL4 782 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ZMYND15Q9H091 742 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM117Q9H0C3 514 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 INTS2Q9H0H0 1204 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 HIPK3Q9H422 1215 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 AGO3Q9H9G7 860 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM8AQ9HCN3 771 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ERVK-5Q9HDB9 667 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 TOPORSQ9NS56 1045 aaPredicted RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ZNHIT6Q9NWK9 470 aaKnown RBP7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 SNTG2Q9NY99 539 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 GCNT4Q9P109 453 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 TBX21Q9UL17 535 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 HES2Q9Y543 173 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 PCDHB2Q9Y5E7 798 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 SQORQ9Y6N5 450 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 ITIH6Q6UXX5 1313 aa7.17□□□□□ -1.26
CLTCL1-206ENST00000540896 GTPBP10A4D1E9 387 aaKnown RBP7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 FAM189A1O60320 539 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 TIMP1P01033 207 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 KRT19P08727 400 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM191BP0C7N4 346 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 SKIP12755 728 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 ITGA4P13612 1032 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 AKAP5P24588 427 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 ITGB8P26012 769 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 PON1P27169 355 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 KRT9P35527 623 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 PBX1P40424 430 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 PIK3CAP42336 1068 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 RAB27AP51159 221 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 CCL23P55773 120 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 POU5F1Q01860 360 aaKnown RBP7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 LRMPQ12912 555 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 TRPC3Q13507 836 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM132DQ14C87 1099 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 SLC10A6Q3KNW5 377 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 C1orf220Q5T0J3 134 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 UBXN11Q5T124 520 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 JADE1Q6IE81 842 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 RIPOR1Q6ZS17 1223 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 CNGA4Q8IV77 575 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 CD302Q8IX05 232 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 TMEM192Q8IY95 271 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 TAS1R2Q8TE23 839 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 SEPT8Q92599 483 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 PGBD4Q96DM1 585 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 IMPG2Q9BZV3 1241 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 NXF3Q9H4D5 531 aaKnown RBP7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 ASB7Q9H672 318 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 PLEKHA5Q9HAU0 1116 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 NLRC4Q9NPP4 1024 aa7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLTCL1-206ENST00000540896 FAM105AQ9NUU6 356 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms