RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PHKBQ93100 1093 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 RRP36Q96EU6 259 aaKnown RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 RPS6KC1Q96S38 1066 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 MAP7D2Q96T17 732 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PPP1R16BQ96T49 567 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 MAP3K14Q99558 947 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 MXRA8Q9BRK3 442 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 IER2Q9BTL4 223 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 MYL10Q9BUA6 226 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SPZ1Q9BXG8 430 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 NT5C3AQ9H0P0 336 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PLEKHA4Q9H4M7 779 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PIDD1Q9HB75 910 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 RXFP1Q9HBX9 757 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 TPSG1Q9NRR2 321 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 SEMA4GQ9NTN9 838 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 TBC1D13Q9NVG8 400 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 ZDHHC7Q9NXF8 308 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PCDHA6Q9UN73 950 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 CEP131Q9UPN4 1083 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 MTF2Q9Y483 593 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-214ENST00000540865 PCDHA8Q9Y5H6 950 aa5.2□□□□□ -1.58
SNHG1-214ENST00000540865 MEIS1O00470 390 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 TM4SF5O14894 197 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 DDX3YO15523 660 aaKnown RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 GAS2O43903 313 aaKnown RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF623O75123 536 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 OFD1O75665 1012 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 RFPL2O75678 378 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 CCNE2O96020 404 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 ALDH2P05091 517 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 SSBP05455 408 aaKnown RBP eCLIP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 URODP06132 367 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 SPATA31C1P0DKV0 1188 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 TDGF1P13385 188 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 CLCN3P51790 818 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 PDE1AP54750 535 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 AK2P54819 239 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 CEP55Q53EZ4 464 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 SWSAP1Q6NVH7 229 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 MIS18BP1Q6P0N0 1132 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 TSSK4Q6SA08 328 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 PARM1Q6UWI2 310 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 SHISA2Q6UWI4 295 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 UNQ6494/PRO21346Q6UXR6 183 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF852Q6ZMS4 543 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 MTSS1LQ765P7 747 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 CYB5R4Q7L1T6 521 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 GET4Q7L5D6 327 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 CATIPQ7Z7H3 387 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 CCDC60Q8IWA6 550 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 TEX2Q8IWB9 1127 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 GPR65Q8IYL9 337 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 FMR1NBQ8N0W7 255 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 LINC01465Q8N7H1 131 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 PIBF1Q8WXW3 757 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 FGF14Q92915 247 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 LZTS2Q9BRK4 669 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 TMEM175Q9BSA9 504 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 RPP25Q9BUL9 199 aaKnown RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 DSCC1Q9BVC3 393 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 HERC2P3Q9BVR0 1158 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 AGO4Q9HCK5 861 aaKnown RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 ZNF302Q9NR11 478 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 DNAJB4Q9UDY4 337 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 SEC63Q9UGP8 760 aaKnown RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 CDH7Q9ULB5 785 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 AKT3Q9Y243 479 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 FAN1Q9Y2M0 1017 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 MRPS17Q9Y2R5 130 aaKnown RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 DMXL2Q8TDJ6 3036 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 FNDC1Q4ZHG4 1894 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-214ENST00000540865 NBEAQ8NFP9 2946 aa5.19□□□□□ -1.58
SNHG1-214ENST00000540865 ITPR1Q14643 2758 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 HELZ2Q9BYK8 2649 aaKnown RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 FANCMQ8IYD8 2048 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 KAT6AQ92794 2004 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 ERICH2A1L162 156 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 TMEM8BA6NDV4 472 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 H3BRJ5 948 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 NRP1O14786 923 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 IFIT3O14879 490 aaKnown RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 TGM5O43548 720 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 DYRK3O43781 588 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 EFEMP2O95967 443 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 FOSP01100 380 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 SDSP20132 328 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 CD72P21854 359 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 GNA15P30679 374 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 KIF5BP33176 963 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 CNR2P34972 360 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 GLUD2P49448 558 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 GNAQP50148 359 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 RAB27AP51159 221 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 GPC3P51654 580 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 CCR3P51677 355 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 RAC1P63000 192 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 CDC42EP1Q00587 391 aa5.18□□□□□ -1.58
SNHG1-214ENST00000540865 HNRNPUQ00839 825 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNHG1-214ENST00000540865 ADCY1Q08828 1119 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms