RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 SDHAP31040 664 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 BMP8BP34820 402 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 POLD2P49005 469 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 ZNF131P52739 623 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 ARF3P61204 181 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 HTRA4P83105 476 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 ARF1P84077 181 aaKnown RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 UBE3AQ05086 875 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 NOGQ13253 232 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 IL10RAQ13651 578 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 KIR3DS1Q14943 382 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 TMEM132BQ14DG7 1078 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 DLGAP5Q15398 846 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 SURF1Q15526 300 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 NUGGCQ68CJ6 796 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 TIGD7Q6NT04 549 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 ZNF449Q6P9G9 518 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 RIOX2Q8IUF8 465 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 BRSK2Q8IWQ3 736 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 TMEFF1Q8IYR6 380 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 TEX9Q8N6V9 391 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 IPCEF1Q8WWN9 437 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 KAT5Q92993 513 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 NSUN4Q96CB9 384 aaKnown RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 EID2BQ96D98 161 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 IQCDQ96DY2 449 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 SLC35A4Q96G79 324 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 JAM3Q9BX67 310 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 KRT84Q9NSB2 600 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 TMEM160Q9NX00 188 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 ABCF2Q9UG63 623 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 SRP68Q9UHB9 627 aaKnown RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 FBXL7Q9UJT9 491 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 ZHX1Q9UKY1 873 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 GOLGA6L6A8MZA4 724 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 ELL2O00472 640 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-209ENST00000540819 BUB1BO60566 1050 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-209ENST00000540819 FSBPO95073 299 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 KITP10721 976 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 ATP6V1B1P15313 513 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 HOXD13P35453 343 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 BCL6P41182 706 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 COPAP53621 1224 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 SUMO3P55854 103 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-209ENST00000540819 POLE2P56282 527 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 CDK17Q00537 523 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 CALD1Q05682 793 aaKnown RBP6.05□□□□□ -1.44
PRKDC-209ENST00000540819 NEXNQ0ZGT2 675 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 PPP2R5CQ13362 524 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 SCARB2Q14108 478 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 ZBTB41Q5SVQ8 909 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 MBLAC2Q68D91 279 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 LIN54Q6MZP7 749 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 CATSPERGQ6ZRH7 1159 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 KDELC2Q7Z4H8 507 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 LCA5Q86VQ0 697 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 IGDCC3Q8IVU1 814 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 CEP57L1Q8IYX8 460 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 TRMT2AQ8IZ69 625 aaKnown RBP6.05□□□□□ -1.44
PRKDC-209ENST00000540819 LINC01356Q8N9X3 169 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 C3orf20Q8ND61 904 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 OTUD7AQ8TE49 926 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-209ENST00000540819 ZUFSPQ96AP4 578 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 PAIP1Q9H074 479 aaKnown RBP6.05□□□□□ -1.44
PRKDC-209ENST00000540819 TMEM8AQ9HCN3 771 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 DIAPH3Q9NSV4 1193 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 LMBRD1Q9NUN5 540 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 FEM1BQ9UK73 627 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 ACSL6Q9UKU0 697 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 TMPRSS11EQ9UL52 423 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 ARHGAP26Q9UNA1 814 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 MAN2B2Q9Y2E5 1009 aa6.05□□□□□ -1.44
PRKDC-209ENST00000540819 ST20-MTHFSA0A0A6YYL1 179 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 AQP12BA6NM10 295 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 H3BUI4 141 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 PODXLO00592 558 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 HTATSF1O43719 755 aaKnown RBP6.04□□□□□ -1.44
PRKDC-209ENST00000540819 HSPA4LO95757 839 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 IGHDP01880 384 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 VAV1P15498 845 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 PFKLP17858 780 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 EN2P19622 333 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-209ENST00000540819 CST5P28325 142 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-209ENST00000540819 ACTN2P35609 894 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 NCKAP1LP55160 1127 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 BPIFB3P59826 476 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 TUSC3Q13454 348 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 NR1I3Q14994 352 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 DNAJC21Q5F1R6 531 aaKnown RBP6.04□□□□□ -1.44
PRKDC-209ENST00000540819 MUM1L1Q5H9M0 696 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 CCDC158Q5M9N0 1113 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 SULT6B1Q6IMI4 303 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 ACAD10Q6JQN1 1059 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 BORAQ6PGQ7 559 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 FBXO38Q6PIJ6 1188 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 B4GALNT4Q76KP1 1039 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 SLCO6A1Q86UG4 719 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 ERC1Q8IUD2 1116 aa6.04□□□□□ -1.44
PRKDC-209ENST00000540819 RPAP2Q8IXW5 612 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms