RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 INTUQ9ULD6 942 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 GRID2IPA4D2P6 1211 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 BTNL10A8MVZ5 291 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 GNA15P30679 374 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 PTK7Q13308 1070 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 ZNF618Q5T7W0 954 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 TSEN34Q9BSV6 310 aaKnown RBP26.26■■□□□ 1.79
TTC3-225ENST00000540756 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.26■■□□□ 1.79
TTC3-225ENST00000540756 ITGA11Q9UKX5 1188 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 V9GYY5 206 aaPredicted RBP26.26■■□□□ 1.79
TTC3-225ENST00000540756 SMIM28A0A1B0GU29 152 aa26.25■■□□□ 1.79
TTC3-225ENST00000540756 TMEM253P0C7T8 217 aa26.25■■□□□ 1.79
TTC3-225ENST00000540756 PTPROQ16827 1216 aa26.25■■□□□ 1.79
TTC3-225ENST00000540756 FBXO47Q5MNV8 452 aa26.25■■□□□ 1.79
TTC3-225ENST00000540756 ZSWIM1Q9BR11 485 aa26.25■■□□□ 1.79
TTC3-225ENST00000540756 STARD7Q9NQZ5 370 aa26.25■■□□□ 1.79
TTC3-225ENST00000540756 PTPN22Q9Y2R2 807 aa26.25■■□□□ 1.79
TTC3-225ENST00000540756 ATMINO43313 823 aaPredicted RBP26.24■■□□□ 1.79
TTC3-225ENST00000540756 FTCDO95954 541 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 ORC1Q13415 861 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 PASD1Q8IV76 773 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 SLC35G2Q8TBE7 412 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 TAF4BQ92750 862 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 ALS2CR12Q96Q35 445 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 BCO2Q9BYV7 579 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 PUF60Q9UHX1 559 aaKnown RBP26.24■■□□□ 1.79
TTC3-225ENST00000540756 PADI3Q9ULW8 664 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 PCDHGC5Q9Y5F6 944 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 ANKRD62A6NC57 917 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 RTN2O75298 545 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 SLU7O95391 586 aaKnown RBP26.24■■□□□ 1.79
TTC3-225ENST00000540756 GTF2F1P35269 517 aaKnown RBP eCLIP26.24■■□□□ 1.795e-13■■■■□ 20.3
TTC3-225ENST00000540756 RBP5P82980 135 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 LPIN1Q14693 890 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 NT5DC4Q86YG4 428 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 CTNNBL1Q8WYA6 563 aaPredicted RBP26.24■■□□□ 1.79
TTC3-225ENST00000540756 HMGXB4Q9UGU5 601 aa26.24■■□□□ 1.79
TTC3-225ENST00000540756 MGEA5O60502 916 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 GZMAP12544 262 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 PAPD7Q5XG87 772 aaKnown RBP26.23■■□□□ 1.79
TTC3-225ENST00000540756 CPA5Q8WXQ8 436 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 CYFIP2Q96F07 1278 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 ZFP42Q96MM3 310 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 PSMB7Q99436 277 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 GOLGA2P5Q9HBQ8 144 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 CDC23Q9UJX2 597 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 PACSIN2Q9UNF0 486 aaPredicted RBP26.23■■□□□ 1.79
TTC3-225ENST00000540756 COG5Q9UP83 839 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 DERAQ9Y315 318 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 JRKLQ9Y4A0 524 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 ATP8B3O60423 1300 aa26.23■■□□□ 1.79
TTC3-225ENST00000540756 THAP12O43422 761 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 AFF1P51825 1210 aaKnown RBP26.22■■□□□ 1.79
TTC3-225ENST00000540756 BPIFB4P59827 614 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 SOX4Q06945 474 aaPredicted RBP26.22■■□□□ 1.79
TTC3-225ENST00000540756 CLEC16AQ2KHT3 1053 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 LPPQ93052 612 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 ERVK-5Q9HDB9 667 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 FAM105AQ9NUU6 356 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 ZNF185O15231 689 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 CTIFO43310 598 aaKnown RBP26.22■■□□□ 1.79
TTC3-225ENST00000540756 UNGP13051 313 aaPredicted RBP26.22■■□□□ 1.79
TTC3-225ENST00000540756 BRD2P25440 801 aaKnown RBP26.22■■□□□ 1.79
TTC3-225ENST00000540756 ATICP31939 592 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 C2CD6Q53TS8 623 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 XKR4Q5GH76 650 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 SLC43A3Q8NBI5 491 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 TPCN2Q8NHX9 752 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 ZNF606Q8WXB4 792 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 TFAP2BQ92481 460 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 DEFB118Q96PH6 123 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 TWNKQ96RR1 684 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 TLR10Q9BXR5 811 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 VRTNQ9H8Y1 702 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 NCANO14594 1321 aa26.22■■□□□ 1.79
TTC3-225ENST00000540756 PTPN11Q06124 597 aaPredicted RBP26.21■■□□□ 1.79
TTC3-225ENST00000540756 LRRC57Q8N9N7 239 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 A0A0A6YYK5 440 aaPredicted RBP26.21■■□□□ 1.79
TTC3-225ENST00000540756 ANO9A1A5B4 782 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 GPR182O15218 404 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 CKBP12277 381 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 IBSPP21815 317 aaPredicted RBP26.21■■□□□ 1.79
TTC3-225ENST00000540756 NAA35Q5VZE5 725 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 ACAD10Q6JQN1 1059 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 WHAMMQ8TF30 809 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 RFFLQ8WZ73 363 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 PHF24Q9UPV7 400 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 SAR1BQ9Y6B6 198 aa26.21■■□□□ 1.79
TTC3-225ENST00000540756 PTGESO14684 152 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 DNA2P51530 1060 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 PAK2Q13177 524 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 TRAF7Q6Q0C0 670 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 ZNF677Q86XU0 584 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 BEST2Q8NFU1 509 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 PDCL3Q9H2J4 239 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 WBP1LQ9NX94 342 aa26.2■■□□□ 1.78
TTC3-225ENST00000540756 CYP1A1P04798 512 aaPredicted RBP26.19■■□□□ 1.78
TTC3-225ENST00000540756 KCNE1P15382 129 aa26.19■■□□□ 1.78
TTC3-225ENST00000540756 CXCR5P32302 372 aa26.19■■□□□ 1.78
TTC3-225ENST00000540756 MBTPS1Q14703 1052 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms