RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CRISPLD1Q9H336 500 aa8□□□□□ -1.13
YBX3-209ENST00000540747 TOPORSQ9NS56 1045 aaPredicted RBP8□□□□□ -1.13
YBX3-209ENST00000540747 PCDHB8Q9UN66 801 aa8□□□□□ -1.13
YBX3-209ENST00000540747 YIPF1Q9Y548 306 aa8□□□□□ -1.13
YBX3-209ENST00000540747 ASPMQ8IZT6 3477 aa8□□□□□ -1.13
YBX3-209ENST00000540747 KIF26AQ9ULI4 1882 aaPredicted RBP8□□□□□ -1.13
YBX3-209ENST00000540747 MYBPHLA2RUH7 354 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 CHURC1-FNTBB4DL54 471 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 K7ERI5 159 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 ZNF263O14978 683 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 GDF9O60383 454 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 GJA1P17302 382 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 CCNE1P24864 410 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 PMLP29590 882 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 WEE1P30291 646 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 LRPAP1P30533 357 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 CTHP32929 405 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 SOX9P48436 509 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 FNTBP49356 437 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 LIMK1P53667 647 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 YARSP54577 528 aaKnown RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 SRSF5Q13243 272 aaKnown RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 CCINQ13939 588 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 SIM2Q14190 667 aaPredicted RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 PDCD11Q14690 1871 aaKnown RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 PPP2R5DQ14738 602 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 TEAD2Q15562 447 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 ZBTB6Q15916 424 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 ST3GAL2Q16842 350 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 SLC10A6Q3KNW5 377 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 CTXN3Q4LDR2 81 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 CYP4A22Q5TCH4 519 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 HAUS3Q68CZ6 603 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 C1orf228Q6PIY5 440 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 MPZL3Q6UWV2 235 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 APBB1IPQ7Z5R6 666 aaPredicted RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 LONP2Q86WA8 852 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 IGSF22Q8N9C0 903 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 ERMNQ8TAM6 284 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 DDX12PQ92771 950 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 KCNN1Q92952 543 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 E2F7Q96AV8 911 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 NTPCRQ9BSD7 190 aaKnown RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 TARS2Q9BW92 718 aaKnown RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 MRPL4Q9BYD3 311 aaKnown RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 GPR88Q9GZN0 384 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 C8orf33Q9H7E9 229 aaPredicted RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 ASAH2Q9NR71 780 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 RBM12Q9NTZ6 932 aaKnown RBP7.99□□□□□ -1.13
YBX3-209ENST00000540747 TUBGCP4Q9UGJ1 667 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 RAB23Q9ULC3 237 aa7.99□□□□□ -1.13
YBX3-209ENST00000540747 CITO14578 2027 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 FASNP49327 2511 aaKnown RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 SPECC1L-ADORA2AF8WAN1 911 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 FAM189A1O60320 539 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 FOXD2O60548 495 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 HIP1RO75146 1068 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 MYL4P12829 197 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 ARPP19P56211 112 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 PEX3P56589 373 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 OSTNP61366 133 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 SHC2P98077 582 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 CACNB1Q02641 598 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 GPR17Q13304 367 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 LRRC32Q14392 662 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 PDIA5Q14554 519 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 ZNF174Q15697 407 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 DGKKQ5KSL6 1271 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 STXBP5Q5T5C0 1151 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 IQCEQ6IPM2 695 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 C1orf186Q6ZWK4 172 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 GAREM2Q75VX8 874 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 KCNK18Q7Z418 384 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 WDR5BQ86VZ2 330 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 RALGPS2Q86X27 583 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 FAM160A2Q8N612 972 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 APPL2Q8NEU8 664 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 SPIRE2Q8WWL2 714 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 CHFRQ96EP1 664 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 ZBTB45Q96K62 511 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 ZNF512Q96ME7 567 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 ACAP3Q96P50 834 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 RUSC1Q9BVN2 902 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 HAPLN2Q9GZV7 340 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 FOXP1Q9H334 677 aaPredicted RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 C17orf75Q9HAS0 396 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 OBP2AQ9NY56 170 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 NUB1Q9Y5A7 615 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 AKAP13Q12802 2813 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 DSPP15924 2871 aaKnown RBP7.98□□□□□ -1.13
YBX3-209ENST00000540747 SPAG17Q6Q759 2223 aa7.98□□□□□ -1.13
YBX3-209ENST00000540747 CCDC163A0A0D9SF12 145 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 A0A1W2PRU2 124 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 TTC26A0AVF1 554 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 OR6C75A6NL08 312 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 SLC38A8A6NNN8 435 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 TOM1L1O75674 476 aa7.97□□□□□ -1.13
YBX3-209ENST00000540747 PRAMEF12O95522 483 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms