RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 ZNF295-AS1Q8N0V1 137 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 PGBD3Q8N328 593 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 MMGT1Q8N4V1 131 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 C4orf32Q8N8J7 132 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 TRIML1Q8N9V2 468 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 LINC00301Q8NCQ3 95 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 EIF2AK1Q9BQI3 630 aaKnown RBP8.06□□□□□ -1.12
NECAP1-204ENST00000540083 LRRC27Q9C0I9 530 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 TMEM60Q9H2L4 133 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 PLEKHA4Q9H4M7 779 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 LUC7LQ9NQ29 371 aaKnown RBP8.06□□□□□ -1.12
NECAP1-204ENST00000540083 GTF2IRD1Q9UHL9 959 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 FRMPD3Q5JV73 1810 aa8.06□□□□□ -1.12
NECAP1-204ENST00000540083 IGSF9BQ9UPX0 1349 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 AKR1B15C9JRZ8 316 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SORBS3O60504 671 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SLITRK3O94933 977 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 MYL1P05976 194 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 PYGLP06737 847 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 THBS1P07996 1170 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CLTBP09497 229 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 ZNF286BP0CG31 522 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SMIM10L2AP0DMW4 78 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SMIM10L2BP0DMW5 78 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 YWHABP31946 246 aaKnown RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 MDH1P40925 334 aaKnown RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 ME1P48163 572 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 RTP1P59025 263 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 MRPS25P82663 173 aaKnown RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 AMPD3Q01432 767 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 PRKCEQ02156 737 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SRSF11Q05519 484 aaKnown RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SPIRE1Q08AE8 756 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 KIF5AQ12840 1032 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 PTK7Q13308 1070 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 MYBPC2Q14324 1141 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 ITIH4Q14624 930 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 DPCR1Q3MIW9 517 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 TMEM63BQ5T3F8 832 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 RNF187Q5TA31 235 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 IER5Q5VY09 327 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 LRIG3Q6UXM1 1119 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CCDC80Q76M96 950 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 MYLK4Q86YV6 388 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CCDC60Q8IWA6 550 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CACNA2D3Q8IZS8 1091 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 TPCN2Q8NHX9 752 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 C1orf216Q8TAB5 229 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SLC7A3Q8WY07 619 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 PPP2R3CQ969Q6 453 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 IQCDQ96DY2 449 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SCLT1Q96NL6 688 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CTAGE1Q96RT6 745 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 USP28Q96RU2 1077 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CCT8L2Q96SF2 557 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 HSD17B14Q9BPX1 270 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 LBHD1Q9BQE6 289 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 LXNQ9BS40 222 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 TIPINQ9BVW5 301 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 PPP1R12CQ9BZL4 782 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 TRIM4Q9C037 500 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CCSER1Q9C0I3 900 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 HSD3B7Q9H2F3 369 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 VCX3BQ9H321 246 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 MMADHCQ9H3L0 296 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 RUBCNLQ9H714 662 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 VCX3AQ9NNX9 186 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 DMAP1Q9NPF5 467 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 TMEM39AQ9NV64 488 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 DNAAF2Q9NVR5 837 aaKnown RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 KCND2Q9NZV8 630 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 SCHIP1Q9P0W5 487 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 ATXN10Q9UBB4 475 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 HDAC6Q9UBN7 1215 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 DBR1Q9UK59 544 aaKnown RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 RPL26L1Q9UNX3 145 aaKnown RBP8.05□□□□□ -1.12
NECAP1-204ENST00000540083 KIAA1024Q9UPX6 916 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 ATP11BQ9Y2G3 1177 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CLIC4Q9Y696 253 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 HTTP42858 3142 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 CENPFP49454 3210 aa8.05□□□□□ -1.12
NECAP1-204ENST00000540083 MYH9P35579 1960 aaKnown RBP8.04□□□□□ -1.12
NECAP1-204ENST00000540083 KAT6AQ92794 2004 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 SMIM35A0A1B0GVV1 85 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 ARHGEF35A5YM69 484 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 ASAP2O43150 1006 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 PQBP1O60828 265 aaKnown RBP8.04□□□□□ -1.12
NECAP1-204ENST00000540083 LINGO3P0C6S8 592 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 RHOXF2BP0C7M4 288 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 INSRRP14616 1297 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 ZFXP17010 805 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-204ENST00000540083 NR1D1P20393 614 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 ATP4AP20648 1035 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 RPL13P26373 211 aaKnown RBP8.04□□□□□ -1.12
NECAP1-204ENST00000540083 MARK3P27448 753 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 CASP14P31944 242 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 RFC2P35250 354 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 ZNF131P52739 623 aa8.04□□□□□ -1.12
NECAP1-204ENST00000540083 ELF3P78545 371 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms