RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PLVAPQ9BX97 442 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 NKX2-4Q9H2Z4 354 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 SLC28A3Q9HAS3 691 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 GCNT4Q9P109 453 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 ADAM28Q9UKQ2 775 aa16.59■□□□□ 0.25
DDB1-216ENST00000539739 A0A1B0GTH6 734 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 CBFA2T2O43439 604 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 KIF4AO95239 1232 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 STAU1O95793 577 aaKnown RBP16.58■□□□□ 0.24
DDB1-216ENST00000539739 DNAJB2P25686 324 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 CTNNB1P35222 781 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 KRT17Q04695 432 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 ELAVL2Q12926 359 aaKnown RBP16.58■□□□□ 0.24
DDB1-216ENST00000539739 DSTYKQ6XUX3 929 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 SLC39A11Q8N1S5 342 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 EHBP1Q8NDI1 1231 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 C3orf58Q8NDZ4 430 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 HASPINQ8TF76 798 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 IGSF21Q96ID5 467 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 CRACR2AQ9BSW2 395 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 VRTNQ9H8Y1 702 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 IFNKQ9P0W0 207 aa16.58■□□□□ 0.24
DDB1-216ENST00000539739 ARHGEF37A1IGU5 675 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 KPNA7A9QM74 516 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 ASS1P00966 412 aaKnown RBP16.57■□□□□ 0.24
DDB1-216ENST00000539739 RB1P06400 928 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 LINC00271P0C7V0 271 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 P4HA1P13674 534 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 WDR72Q3MJ13 1102 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 ZNF667Q5HYK9 610 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 PPP2R2DQ66LE6 453 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 SEMA4DQ92854 862 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 TIFAQ96CG3 184 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 XYLT2Q9H1B5 865 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 MARCH5Q9NX47 278 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 STK39Q9UEW8 545 aa16.57■□□□□ 0.24
DDB1-216ENST00000539739 SF3B1O75533 1304 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDB1-216ENST00000539739 ERVK-21P61565 698 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 TNNC1P63316 161 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 NOP14P78316 857 aaKnown RBP16.56■□□□□ 0.24
DDB1-216ENST00000539739 TAP1Q03518 808 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 SCARA3Q6AZY7 606 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 C17orf80Q9BSJ5 609 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 PI4K2AQ9BTU6 479 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 INTS2Q9H0H0 1204 aaKnown RBP16.56■□□□□ 0.24
DDB1-216ENST00000539739 C5orf67F2Z3F1 127 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 F8W810 466 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 FGF18O76093 207 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 ARHGEF15O94989 841 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 ITGB1P05556 798 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 BRCC3P46736 316 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 AARSP49588 968 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDB1-216ENST00000539739 PLCB3Q01970 1234 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 NR1I3Q14994 352 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 TIGD5Q53EQ6 642 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 FUT10Q6P4F1 479 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 SARM1Q6SZW1 724 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 CD300LGQ6UXG3 332 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 TMEM173Q86WV6 379 aaPredicted RBP16.56■□□□□ 0.24
DDB1-216ENST00000539739 KLHL23Q8NBE8 558 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 LMO3Q8TAP4 145 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 FAXDC2Q96IV6 333 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 SUSD3Q96L08 255 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 SENP8Q96LD8 212 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
DDB1-216ENST00000539739 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 C11orf84Q9BUA3 381 aaPredicted RBP16.56■□□□□ 0.24
DDB1-216ENST00000539739 TRIM5Q9C035 493 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■■■■■ 34.5
DDB1-216ENST00000539739 GDAP2Q9NXN4 497 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 NXF1Q9UBU9 619 aaKnown RBP16.56■□□□□ 0.24
DDB1-216ENST00000539739 PUF60Q9UHX1 559 aaKnown RBP16.56■□□□□ 0.24
DDB1-216ENST00000539739 MTUS1Q9ULD2 1270 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 SNX9Q9Y5X1 595 aa16.56■□□□□ 0.24
DDB1-216ENST00000539739 CYB561D2O14569 222 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 SPTLC1O15269 473 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 TEX33O43247 280 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 HUS1O60921 280 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 ODC1P11926 461 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 SLC9A1P19634 815 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 IGFBP6P24592 240 aaPredicted RBP16.55■□□□□ 0.24
DDB1-216ENST00000539739 PON1P27169 355 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 HS1BP3Q53T59 392 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 FAM81BQ96LP2 452 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
DDB1-216ENST00000539739 XPO4Q9C0E2 1151 aaKnown RBP16.55■□□□□ 0.24
DDB1-216ENST00000539739 M0QZQ0 153 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 LRRN2O75325 713 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 SCN1AP35498 2009 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 LRMPQ12912 555 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 SYCP1Q15431 976 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 SPOPLQ6IQ16 392 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 DPH6Q7L8W6 267 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 DDX53Q86TM3 631 aaKnown RBP16.54■□□□□ 0.24
DDB1-216ENST00000539739 APPL2Q8NEU8 664 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
DDB1-216ENST00000539739 BCL7CQ8WUZ0 217 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms