RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 SYN3O14994 580 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 TRAPPC3O43617 180 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 SEC24AO95486 1093 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 MYL1P05976 194 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
HMGA2-209ENST00000539662 POU5F1Q01860 360 aaKnown RBP11.58□□□□□ -0.56
HMGA2-209ENST00000539662 ROR1Q01973 937 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 CYP24A1Q07973 514 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 RAB33AQ14088 237 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 KCNB1Q14721 858 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 CBX2Q14781 532 aaPredicted RBP11.58□□□□□ -0.56
HMGA2-209ENST00000539662 DSTYKQ6XUX3 929 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 GPR149Q86SP6 731 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 ADHFE1Q8IWW8 467 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 C12orf56Q8IXR9 622 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 GJD3Q8N144 294 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 XXYLT1Q8NBI6 393 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 RPGRIP1Q96KN7 1286 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 RTP3Q9BQQ7 232 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 INTS13Q9NVM9 706 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 DZANK1Q9NVP4 752 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 FBXW11Q9UKB1 542 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 AGAP1Q9UPQ3 857 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 BACE2Q9Y5Z0 518 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 NOTCH4Q99466 2003 aa11.58□□□□□ -0.56
HMGA2-209ENST00000539662 FSD2A1L4K1 749 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 TNFRSF10AO00220 468 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 XPOTO43592 962 aaKnown RBP11.57□□□□□ -0.56
HMGA2-209ENST00000539662 HCRTO43612 131 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 EXOC3O60645 756 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 N4BP1O75113 896 aaKnown RBP11.57□□□□□ -0.56
HMGA2-209ENST00000539662 PRPF40AO75400 957 aaKnown RBP11.57□□□□□ -0.56
HMGA2-209ENST00000539662 CST3P01034 146 aaPredicted RBP11.57□□□□□ -0.56
HMGA2-209ENST00000539662 SRGAP2BP0DMP2 458 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 DLATP10515 647 aaKnown RBP11.57□□□□□ -0.56
HMGA2-209ENST00000539662 BMP6P22004 513 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 DLG4P78352 724 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 NTHL1P78549 312 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 CCDC142Q17RM4 750 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 CTXN3Q4LDR2 81 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 C1orf220Q5T0J3 134 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 SLC8B1Q6J4K2 584 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 ANKS3Q6ZW76 656 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 CSGALNACT2Q8N6G5 542 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 ST13P5Q8NFI4 369 aaPredicted RBP11.57□□□□□ -0.56
HMGA2-209ENST00000539662 OR10T2Q8NGX3 314 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 SPATA20Q8TB22 786 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 EEF2KMTQ96G04 330 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 MFSD14AQ96MC6 490 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 CRISPLD1Q9H336 500 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 EPHX3Q9H6B9 360 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 SFXN1Q9H9B4 322 aa11.57□□□□□ -0.56
HMGA2-209ENST00000539662 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 LOC730098B7Z3J9 87 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
HMGA2-209ENST00000539662 CYB561D2O14569 222 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 KIAA0391O15091 583 aaKnown RBP11.56□□□□□ -0.56
HMGA2-209ENST00000539662 CCL16O15467 120 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 ZMYND10O75800 440 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 ABLIM3O94929 683 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 OAZ2O95190 189 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 NR3C1P04150 777 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 C8AP07357 584 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 KRT19P08727 400 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
HMGA2-209ENST00000539662 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
HMGA2-209ENST00000539662 PRCPP42785 496 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 PMS1P54277 932 aaKnown RBP11.56□□□□□ -0.56
HMGA2-209ENST00000539662 ITIH3Q06033 890 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 PSMD6Q15008 389 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 ZCWPW2Q504Y3 356 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 WSCD1Q658N2 575 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 POTEHQ6S545 545 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 RNF19BQ6ZMZ0 732 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 HS2ST1Q7LGA3 356 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 OSTM1Q86WC4 334 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 SLC7A14Q8TBB6 771 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 TIGD1Q96MW7 591 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 PHF7Q9BWX1 381 aaPredicted RBP11.56□□□□□ -0.56
HMGA2-209ENST00000539662 HCFC1R1Q9NWW0 138 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 MAN1B1Q9UKM7 699 aa11.56□□□□□ -0.56
HMGA2-209ENST00000539662 TRIM49BA6NDI0 452 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
HMGA2-209ENST00000539662 KPNA7A9QM74 516 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 PDXKO00764 312 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 AKAP3O75969 853 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 PAPLNO95428 1278 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 TMEM191BP0C7N4 346 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 TYMPP19971 482 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 TAF6P49848 677 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 SNRPFP62306 86 aaKnown RBP11.55□□□□□ -0.56
HMGA2-209ENST00000539662 CREMQ03060 361 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 YWHAHQ04917 246 aaPredicted RBP11.55□□□□□ -0.56
HMGA2-209ENST00000539662 BFSP1Q12934 665 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 ATAT1Q5SQI0 421 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 OVOS1Q6IE37 1185 aa11.55□□□□□ -0.56
HMGA2-209ENST00000539662 ZNF280DQ6N043 979 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms