RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CASP5P51878 434 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 DGKQP52824 942 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ATP8B2P98198 1209 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 SMAD4Q13485 552 aaKnown RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PLS1Q14651 629 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 HLXQ14774 488 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 CNN3Q15417 329 aaKnown RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ARHGAP15Q53QZ3 475 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 SLFN12LQ6IEE8 588 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PLEKHA7Q6IQ23 1121 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 WDR53Q7Z5U6 358 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 TICAM2Q86XR7 235 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 CAMKK1Q8N5S9 505 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 FBXO15Q8NCQ5 510 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 FAM84AQ96KN4 292 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 MRGPRX4Q96LA9 322 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 SAMD11Q96NU1 681 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 NEU1Q99519 415 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 HEPHQ9BQS7 1158 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ADI1Q9BV57 179 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 NSMCE4AQ9NXX6 385 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 JKAMPQ9P055 326 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 GRHPRQ9UBQ7 328 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 Q9UFV3 132 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 MAFFQ9ULX9 164 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 PCDHA6Q9UN73 950 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 RUVBL1Q9Y265 456 aaKnown RBP1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ZBTB1Q9Y2K1 713 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 STXBP5LQ9Y2K9 1186 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ATRNL1Q5VV63 1379 aa1.28□□□□□ -2.2
HIF1A-204ENST00000539097 ST20-MTHFSA0A0A6YYL1 179 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ABHD14A-ACY1A0A1B0GW23 586 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 KRTAP23-1A1A580 65 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 AQP12BA6NM10 295 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 RASA4BC9J798 803 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 F8W031 263 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 RASA4O43374 803 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 TCEA3O75764 348 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 TNFRSF6BO95407 300 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 AGR2O95994 175 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 WNT11O96014 354 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 KNG1P01042 644 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 LCKP06239 509 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 CT47B1P0C2W7 299 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 IL1R1P14778 569 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 TNFSF4P23510 183 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 HOXA13P31271 388 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 VIPR1P32241 457 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ALDH1A3P47895 512 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ALDH9A1P49189 494 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 TOB1P50616 345 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 COPAP53621 1224 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 SEC24CP53992 1094 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 PNLIPRP1P54315 467 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 USP10Q14694 798 aaKnown RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 KIAA0753Q2KHM9 967 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC184Q52MB2 194 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 C3orf38Q5JPI3 329 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 HIBCHQ6NVY1 386 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 INO80CQ6PI98 192 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC149Q6ZUS6 474 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF572Q7Z3I7 529 aaPredicted RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ADGRA1Q86SQ6 560 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 FAM90A1Q86YD7 464 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 OR2C3Q8N628 320 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ACRBPQ8NEB7 543 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 IFI44Q8TCB0 444 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 MTFMTQ96DP5 389 aaKnown RBP1.28□□□□□ -2.21
HIF1A-204ENST00000539097 LRIG1Q96JA1 1093 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 FAM227BQ96M60 508 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 CLIC6Q96NY7 704 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 TUBGCP5Q96RT8 1024 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 SPATA25Q9BR10 227 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 KCNH6Q9H252 994 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 KCNK9Q9NPC2 374 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ING3Q9NXR8 418 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 COL20A1Q9P218 1284 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 FBXO40Q9UH90 709 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 ZFP69BQ9UJL9 534 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 PCDHA3Q9Y5H8 950 aa1.28□□□□□ -2.21
HIF1A-204ENST00000539097 SPATA31D1Q6ZQQ2 1576 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 CCDC151A5D8V7 595 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 B5MCH6 92 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 IFNL4K9M1U5 179 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 LY86O95711 162 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 NDST3O95803 873 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 CYP21A2P08686 494 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 ADSLP30566 484 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-204ENST00000539097 MAN2A2P49641 1150 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 EXOSC9Q06265 439 aaKnown RBP1.27□□□□□ -2.21
HIF1A-204ENST00000539097 CHAF1AQ13111 956 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-204ENST00000539097 PICALMQ13492 652 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 BOP1Q14137 746 aaKnown RBP1.27□□□□□ -2.21
HIF1A-204ENST00000539097 INSCQ1MX18 579 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 AAK1Q2M2I8 961 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 MST1LQ2TV78 715 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 HYIQ5T013 277 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 LCE4AQ5TA78 99 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 PPP4R4Q6NUP7 873 aa1.27□□□□□ -2.21
HIF1A-204ENST00000539097 JMJD6Q6NYC1 403 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms