RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SMC3Q9UQE7 1217 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 SHISA7A6NL88 538 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 FAM170BA6NMN3 283 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 LACTBL1A8MY62 500 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 MOSPD3O75425 235 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 OAZ2O95190 189 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 VNN2O95498 520 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 PLCG1P19174 1290 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 CD72P21854 359 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 SCP2P22307 547 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 UBA7P41226 1012 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 MCM2P49736 904 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 EPHA5P54756 1037 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 YWHAHQ04917 246 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-206ENST00000538970 GRIN1Q05586 938 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 ENOX2Q16206 610 aaKnown RBP13.61□□□□□ -0.23
VAMP1-206ENST00000538970 ST3GAL2Q16842 350 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 CYP4A22Q5TCH4 519 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 IQCEQ6IPM2 695 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 HS6ST3Q8IZP7 471 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 ELMOD1Q8N336 334 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 BEST2Q8NFU1 509 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 DNASE1L2Q92874 299 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 ASB16Q96NS5 453 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 FIZ1Q96SL8 496 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 OXCT2Q9BYC2 517 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-206ENST00000538970 PARVGQ9HBI0 331 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 HEBP1Q9NRV9 189 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 YIPF1Q9Y548 306 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
VAMP1-206ENST00000538970 PATJQ8NI35 1801 aa13.61□□□□□ -0.23
VAMP1-206ENST00000538970 CEP250Q9BV73 2442 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 A0A0B4J269 797 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 PPEF2O14830 753 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 OGTO15294 1046 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 TRAK2O60296 914 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 FAM13AO94988 1023 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 BMP15O95972 392 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 ADRB2P07550 413 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 COL4A2P08572 1712 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 OR4Q2P0C623 313 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 TARSP26639 723 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 LONP1P36776 959 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 MAGEA9P43362 315 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 GRM2Q14416 872 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 DHX8Q14562 1220 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 MCM6Q14566 821 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 KARSQ15046 597 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 LARP1BQ659C4 914 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 SLC39A4Q6P5W5 647 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 MAP4K3Q8IVH8 894 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 LEMD2Q8NC56 503 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 RUBCNQ92622 972 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 RAD54LQ92698 747 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 ZFP14Q9HCL3 533 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 ASAH2Q9NR71 780 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 CPSF3Q9UKF6 684 aaKnown RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 FBXO4Q9UKT5 387 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
VAMP1-206ENST00000538970 MIA3Q5JRA6 1907 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 MYH11P35749 1972 aa13.6□□□□□ -0.23
VAMP1-206ENST00000538970 OR6C75A6NL08 312 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 LAMTOR5O43504 91 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 TBCAO75347 108 aaKnown RBP13.59□□□□□ -0.23
VAMP1-206ENST00000538970 CENPBP07199 599 aaPredicted RBP13.59□□□□□ -0.23
VAMP1-206ENST00000538970 MYL4P12829 197 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 ZNF528Q3MIS6 628 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 SPATA1Q5VX52 437 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 DSTYKQ6XUX3 929 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 ZNF852Q6ZMS4 543 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 BRAPQ7Z569 592 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 RASSF8Q8NHQ8 419 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 SMARCD2Q92925 531 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 ZSWIM3Q96MP5 696 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 NELL2Q99435 816 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 MSTO1Q9BUK6 570 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 DNAJC25Q9H1X3 360 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 CRISPLD1Q9H336 500 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 RPF1Q9H9Y2 349 aaKnown RBP13.59□□□□□ -0.23
VAMP1-206ENST00000538970 ACACBO00763 2458 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 CACNA1GO43497 2377 aa13.59□□□□□ -0.23
VAMP1-206ENST00000538970 TPRP12270 2363 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 TSC2P49815 1807 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 NFICP08651 508 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 GJA1P17302 382 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 TYMPP19971 482 aa13.58□□□□□ -0.24
VAMP1-206ENST00000538970 NMT1P30419 496 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 RPS9P46781 194 aaKnown RBP13.58□□□□□ -0.24
VAMP1-206ENST00000538970 GTF2BQ00403 316 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms