RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 UBAP1Q9NZ09 502 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 H2AFY2Q9P0M6 372 aaPredicted RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 FEM1BQ9UK73 627 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 CDC42BPGQ6DT37 1551 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 AIM2O14862 343 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 TBX3O15119 743 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 NBNO60934 754 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 GYPCP04921 128 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 TNFRSF8P28908 595 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 FDFT1P37268 417 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 CEBPAP49715 358 aaPredicted RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 ITGA8P53708 1063 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 SEC24CP53992 1094 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 VCPP55072 806 aaKnown RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 SNX17Q15036 470 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 LRRC36Q1X8D7 754 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 TAF2Q6P1X5 1199 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 TMC5Q6UXY8 1006 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 RBM43Q6ZSC3 357 aaKnown RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 HDDC2Q7Z4H3 204 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 CCDC60Q8IWA6 550 aaPredicted RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 RAB42Q8N4Z0 105 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 NBPF15Q8N660 670 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 ANKS1AQ92625 1134 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 CCDC28BQ9BUN5 200 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 C1orf50Q9BV19 199 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 PIH1D3Q9NQM4 214 aaKnown RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 GGT7Q9UJ14 662 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 PNPLA7Q6ZV29 1317 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 C5orf58C9J3I9 102 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 H7C1W4 665 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 KCNN4O15554 427 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 KRT6AP02538 564 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 KRT6BP04259 564 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 NUP62P37198 522 aaPredicted RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 KRT6CP48668 564 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 CHI3L2Q15782 390 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 MDH1BQ5I0G3 518 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 TBC1D10CQ8IV04 446 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 OR6B3Q8NGW1 331 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 MRPL48Q96GC5 212 aaKnown RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 MPP4Q96JB8 637 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 MRPL4Q9BYD3 311 aaKnown RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 ANKARQ7Z5J8 1434 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 CDH6P55285 790 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 MAPK7Q13164 816 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 MAPK6Q16659 721 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 TTC23LQ6PF05 361 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 USP17L2Q6R6M4 530 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 LPCAT2Q7L5N7 544 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 TBC1D19Q8N5T2 526 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 EGFL8Q99944 293 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 ILKAPQ9H0C8 392 aaPredicted RBP7.24□□□□□ -1.25
SORT1-209ENST00000538502 BTG4Q9NY30 223 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 CTNNAL1Q9UBT7 734 aa7.24□□□□□ -1.25
SORT1-209ENST00000538502 C3orf70A6NLC5 250 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 TPP2P29144 1249 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 PEX5P50542 639 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 EPS8Q12929 822 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 AARS2Q5JTZ9 985 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 RC3H1Q5TC82 1133 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 KHDRBS2Q5VWX1 349 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 PDXDC2PQ6P474 469 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 B3GNT6Q6ZMB0 384 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 TMPRSS6Q8IU80 811 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 AGBL1Q96MI9 1066 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 C17orf80Q9BSJ5 609 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PHF20Q9BVI0 1012 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PLEKHA5Q9HAU0 1116 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 EMSYQ7Z589 1322 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 BCL10O95999 233 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 UCHL3P15374 230 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 GRK2P25098 689 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 ADARP55265 1226 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 PTK6Q13882 451 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 SLC29A2Q14542 456 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 LLGL1Q15334 1064 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 ARMC3Q5W041 872 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 C3orf62Q6ZUJ4 267 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 GCNAQ96QF7 691 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PNKPQ96T60 521 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 DDX50Q9BQ39 737 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 TRIM9Q9C026 710 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 SP110Q9HB58 689 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 CASS4Q9NQ75 786 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 DAPK2Q9UIK4 370 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 ZNF608Q9ULD9 1512 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 ZSCAN9O15535 394 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 FXR1P51114 621 aaKnown RBP eCLIP7.23□□□□□ -1.25
SORT1-209ENST00000538502 MXD4Q14582 209 aaPredicted RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 GSTA3Q16772 222 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 SWT1Q5T5J6 900 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 MMTAG2Q9BU76 263 aaKnown RBP7.23□□□□□ -1.25
SORT1-209ENST00000538502 KLHL31Q9H511 634 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 PCMTD2Q9NV79 361 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 SELENONQ9NZV5 590 aa7.23□□□□□ -1.25
SORT1-209ENST00000538502 HEY2Q9UBP5 337 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms