RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SESN2P58004 480 aaPredicted RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 COPS2P61201 443 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 GRIN1Q05586 938 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ZBTB41Q5SVQ8 909 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ANKMY2Q8IV38 441 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 HVCN1Q96D96 273 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 SLC4A9Q96Q91 983 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ZBTB18Q99592 522 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 UBR1Q8IWV7 1749 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TCRBV5S4A2TA0A5A2 114 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 KIF3CO14782 793 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 IRF6O14896 467 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 SLC9A1P19634 815 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TROAPQ12815 778 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 NR1H3Q13133 447 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TSNAXIP1Q2TAA8 658 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 LRRC43Q8N309 656 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 CCNYL1Q8N7R7 359 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 DAGLBQ8NCG7 672 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 RFFLQ8WZ73 363 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 MRPS31Q92665 395 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 HAUS8Q9BT25 410 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TSSK1BQ9BXA7 367 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 HDAC6Q9UBN7 1215 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TIMM13Q9Y5L4 95 aaPredicted RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 FAM205AQ6ZU69 1335 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 KRT37O76014 449 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 SUN1O94901 812 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 CKBP12277 381 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 GPD1P21695 349 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 MAP4P27816 1152 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 CASP4P49662 377 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TMEM132BQ14DG7 1078 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 Q4G0T1 1027 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 GJC2Q5T442 439 aaPredicted RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 MIB1Q86YT6 1006 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 GSPT2Q8IYD1 628 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 ADSSL1Q8N142 457 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 PDCD2LQ9BRP1 358 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 DDHD2O94830 711 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 NPTX2P47972 431 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 GRB10Q13322 594 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 MDH1BQ5I0G3 518 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ATG16L1Q676U5 607 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 CCDC137Q6PK04 289 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 TRIM59Q8IWR1 403 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 LMNTD2Q8IXW0 634 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ACSF2Q96CM8 615 aaPredicted RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 FAM118BQ9BPY3 351 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TRIM54Q9BYV2 358 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 SLC13A1Q9BZW2 595 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 PDGFDQ9GZP0 370 aaPredicted RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 KRT82Q9NSB4 513 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 BFARQ9NZS9 450 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 PLAAQ9Y263 795 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TMEM247A6NEH6 219 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TMEM88BA6NKF7 163 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 CKMP06732 381 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 VCPP55072 806 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 CUL1Q13616 776 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 MAPRE1Q15691 268 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 RCOR2Q8IZ40 523 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 ATP6V0D2Q8N8Y2 350 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 OSBPL9Q96SU4 736 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 POP1Q99575 1024 aaKnown RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 COG4Q9H9E3 785 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 CYP4F11Q9HBI6 524 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 VTA1Q9NP79 307 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 FAM198AQ9UFP1 575 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 CHORDC1Q9UHD1 332 aaPredicted RBP5.64□□□□□ -1.51
LRP6-203ENST00000538239 SLC25A13Q9UJS0 675 aa5.64□□□□□ -1.51
LRP6-203ENST00000538239 TMCC1O94876 653 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 UCHL3P15374 230 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ACO1P21399 889 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 FKBP1AP62942 108 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 TMPRSS15P98073 1019 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 NNTQ13423 1086 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 MKRN4PQ13434 485 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 CAPRIN1Q14444 709 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 GRIK5Q16478 980 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 HS6ST3Q8IZP7 471 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ATP11CQ8NB49 1132 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 NCLNQ969V3 563 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 PPWD1Q96BP3 646 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 SNF8Q96H20 258 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CINPQ9BW66 212 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 ABHD16BQ9H3Z7 469 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CASS4Q9NQ75 786 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 IL17RBQ9NRM6 502 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 CAPN11Q9UMQ6 739 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 C3orf70A6NLC5 250 aaPredicted RBP5.63□□□□□ -1.51
LRP6-203ENST00000538239 CCDC188H7C350 402 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 OGTO15294 1046 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 MAP3K13O43283 966 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 ENDOD1O94919 500 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 EGFRP00533 1210 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 PGK1P00558 417 aa5.63□□□□□ -1.51
LRP6-203ENST00000538239 SLC11A2P49281 568 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms