RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 EXOC7Q9UPT5 735 aa9.11□□□□□ -0.95
SPARC-208ENST00000538026 DERAQ9Y315 318 aa9.11□□□□□ -0.95
SPARC-208ENST00000538026 CDY1Q9Y6F8 540 aa9.11□□□□□ -0.95
SPARC-208ENST00000538026 ZMYND10O75800 440 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 CDR1P51861 262 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 NTHL1P78549 312 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 KNOP1Q1ED39 458 aaKnown RBP9.1□□□□□ -0.95
SPARC-208ENST00000538026 C12orf56Q8IXR9 622 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 CEP57L1Q8IYX8 460 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 GPD1LQ8N335 351 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 BEST2Q8NFU1 509 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 ERCC4Q92889 916 aaPredicted RBP9.1□□□□□ -0.95
SPARC-208ENST00000538026 TSPAN18Q96SJ8 248 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 RHOBTB2Q9BYZ6 727 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 PRKD2Q9BZL6 878 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 PLEKHA4Q9H4M7 779 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 DPP3Q9NY33 737 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 RBAKQ9NYW8 714 aaPredicted RBP9.1□□□□□ -0.95
SPARC-208ENST00000538026 FAM50BQ9Y247 325 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 ATP6V1DQ9Y5K8 247 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 F5P12259 2224 aa9.1□□□□□ -0.95
SPARC-208ENST00000538026 FAM86C2PA6NEL3 165 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 HCRTO43612 131 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 TRAPPC3O43617 180 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 RHOBTB3O94955 611 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 IL18RAPO95256 599 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 CST3P01034 146 aaPredicted RBP9.09□□□□□ -0.95
SPARC-208ENST00000538026 CYP11A1P05108 521 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 C8AP07357 584 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 SSTR3P32745 418 aaPredicted RBP9.09□□□□□ -0.95
SPARC-208ENST00000538026 MCM4P33991 863 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 MTHFRP42898 656 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 CASP4P49662 377 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 CYP2J2P51589 502 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 TFAMQ00059 246 aaKnown RBP9.09□□□□□ -0.95
SPARC-208ENST00000538026 PNOCQ13519 176 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 CCDC142Q17RM4 750 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 ATAT1Q5SQI0 421 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 C1orf220Q5T0J3 134 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 CES5AQ6NT32 575 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 ARMCX5Q6P1M9 558 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 RNF19BQ6ZMZ0 732 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 C15orf39Q6ZRI6 1047 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 ANKS3Q6ZW76 656 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 LIMS2Q7Z4I7 341 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 LRRTM3Q86VH5 581 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 TMEM87AQ8NBN3 555 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 RDH13Q8NBN7 331 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 OR10T2Q8NGX3 314 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 ZNF461Q8TAF7 563 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 SPATA20Q8TB22 786 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 TMEM174Q8WUU8 243 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 MFSD14AQ96MC6 490 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 MYADMQ96S97 322 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 PYM1Q9BRP8 204 aaKnown RBP9.09□□□□□ -0.95
SPARC-208ENST00000538026 MTMR12Q9C0I1 747 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 WDR6Q9NNW5 1121 aaKnown RBP9.09□□□□□ -0.95
SPARC-208ENST00000538026 INTS13Q9NVM9 706 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 HCFC1R1Q9NWW0 138 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 MAPK8IP1Q9UQF2 711 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 NUB1Q9Y5A7 615 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 NME7Q9Y5B8 376 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 CFAP54Q96N23 3096 aa9.09□□□□□ -0.95
SPARC-208ENST00000538026 UBE4BO95155 1302 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 ARHGEF37A1IGU5 675 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 ZNF233A6NK53 670 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 CYB561D2O14569 222 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 CCL16O15467 120 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 LDHAP00338 332 aaKnown RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 ITGB3P05106 788 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 ASGR2P07307 311 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 SRGAP2BP0DMP2 458 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 TYMPP19971 482 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 BMP6P22004 513 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 POLR2BP30876 1174 aaKnown RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 CYP24A1Q07973 514 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 PSMD2Q13200 908 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 SNRNP35Q16560 246 aaKnown RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 CTXN3Q4LDR2 81 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 WSCD1Q658N2 575 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 PDXDC1Q6P996 788 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 GRASPQ7Z6J2 395 aaPredicted RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 OSTM1Q86WC4 334 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 NT5DC4Q86YG4 428 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 SMYD4Q8IYR2 804 aaPredicted RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 PIAS4Q8N2W9 510 aaPredicted RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 TTC9BQ8N6N2 239 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 ST13P5Q8NFI4 369 aaPredicted RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 SLC7A14Q8TBB6 771 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 SMG7Q92540 1137 aaKnown RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 ELMO3Q96BJ8 720 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 RIPOR3Q96MK2 946 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 NECTIN4Q96NY8 510 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 TMLHEQ9NVH6 421 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 ZDHHC7Q9NXF8 308 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 DNMT3BQ9UBC3 853 aaKnown RBP9.08□□□□□ -0.96
SPARC-208ENST00000538026 LIMD1Q9UGP4 676 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 RAPGEFL1Q9UHV5 662 aa9.08□□□□□ -0.96
SPARC-208ENST00000538026 CIZ1Q9ULV3 898 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms