RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 SCARA3Q6AZY7 606 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 CCAR2Q8N163 923 aaKnown RBP13.23□□□□□ -0.29
DDB1-209ENST00000537877 TTC39CQ8N584 583 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 GSTCDQ8NEC7 633 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 RSPH1Q8WYR4 309 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 ELMO3Q96BJ8 720 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 SCLYQ96I15 445 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 TMEM161AQ9NX61 479 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 PPP2R2CQ9Y2T4 447 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 CENPFP49454 3210 aa13.23□□□□□ -0.29
DDB1-209ENST00000537877 KIAA0100Q14667 2235 aaKnown RBP13.23□□□□□ -0.29
DDB1-209ENST00000537877 ATP8B3O60423 1300 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 TDRD15B5MCY1 1934 aaKnown RBP13.22□□□□□ -0.29
DDB1-209ENST00000537877 RBAK-RBAKDNI3L0D1 243 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 PIRO00625 290 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 KRT5P13647 590 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 USP8P40818 1118 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 PDE6CP51160 858 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 SCNN1GP51170 649 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 SOX4Q06945 474 aaPredicted RBP13.22□□□□□ -0.29
DDB1-209ENST00000537877 SPA17Q15506 151 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 NAB2Q15742 525 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 SLC18A3Q16572 532 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 SV2CQ496J9 727 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 CNKSR3Q6P9H4 555 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 GLB1LQ6UWU2 654 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 ZNF571Q7Z3V5 609 aaPredicted RBP13.22□□□□□ -0.29
DDB1-209ENST00000537877 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 TXLNBQ8N3L3 684 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 DESI2Q9BSY9 194 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 SYT11Q9BT88 431 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 LUC7LQ9NQ29 371 aaKnown RBP13.22□□□□□ -0.29
DDB1-209ENST00000537877 SPTLC3Q9NUV7 552 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 NXF1Q9UBU9 619 aaKnown RBP13.22□□□□□ -0.29
DDB1-209ENST00000537877 PCDHB4Q9Y5E5 795 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 LTBP2Q14767 1821 aa13.22□□□□□ -0.29
DDB1-209ENST00000537877 ENPP3O14638 875 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 CYP26A1O43174 497 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 HOXA2O43364 376 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 TIMP1P01033 207 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 RPL9P32969 192 aaKnown RBP13.21□□□□□ -0.29
DDB1-209ENST00000537877 CLCN1P35523 988 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 TAF6P49848 677 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 ZNF132P52740 706 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 ZNF677Q86XU0 584 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 RBBP8NLQ8NC74 664 aaPredicted RBP13.21□□□□□ -0.29
DDB1-209ENST00000537877 ACRBPQ8NEB7 543 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 URGCPQ8TCY9 931 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 UROC1Q96N76 676 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 CISHQ9NSE2 258 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 NOCTQ9UK39 431 aaKnown RBP13.21□□□□□ -0.29
DDB1-209ENST00000537877 POLIQ9UNA4 740 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 MICAL3Q7RTP6 2002 aa13.21□□□□□ -0.29
DDB1-209ENST00000537877 PPEF2O14830 753 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 PFKMP08237 780 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 CYP11B1P15538 503 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 EN2P19622 333 aaPredicted RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 PAX3P23760 479 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 INCA1Q0VD86 236 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 TUSC3Q13454 348 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 C10orf76Q5T2E6 689 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 TMEM270Q6UE05 265 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 TMEM130Q8N3G9 435 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 C17orf53Q8N3J3 647 aaPredicted RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDB1-209ENST00000537877 SMYD3Q9H7B4 428 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 MIOSQ9NXC5 875 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 GDAP2Q9NXN4 497 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 KANSL3Q9P2N6 904 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 ADAMTS1Q9UHI8 967 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 REXO2Q9Y3B8 237 aaKnown RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 PCDHB7Q9Y5E2 793 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 SCN1AP35498 2009 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 A0A087X0T9 212 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 KPNA7A9QM74 516 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 ZNF263O14978 683 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 WEE2P0C1S8 567 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 FAM228BP0C875 321 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 RAG1P15918 1043 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 CD58P19256 250 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 IBSPP21815 317 aaPredicted RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 AFF1P51825 1210 aaKnown RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 VAV2P52735 878 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 CDR2Q01850 454 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 GFPT1Q06210 699 aaPredicted RBP13.2□□□□□ -0.3
DDB1-209ENST00000537877 IKBKEQ14164 716 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 CLLU1OSQ5K130 101 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 DEFB128Q7Z7B8 93 aa13.2□□□□□ -0.3
DDB1-209ENST00000537877 NOP9Q86U38 636 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms