RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ALFQ53S48 1182 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 STEAP3Q658P3 488 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 NXNQ6DKJ4 435 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 IQCEQ6IPM2 695 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ZNF280DQ6N043 979 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ZSCAN25Q6NSZ9 544 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 PAQR3Q6TCH7 311 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ATG14Q6ZNE5 492 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 GADL1Q6ZQY3 521 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 EP400NLQ6ZTU2 488 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CENPQQ7L2Z9 268 aaPredicted RBP2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CHST3Q7LGC8 479 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 BRAPQ7Z569 592 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 MILR1Q7Z6M3 343 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 LRRTM3Q86VH5 581 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 RBM12BQ8IXT5 1001 aaKnown RBP2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 TCEAL8Q8IYN2 117 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 TMTC2Q8N394 836 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ANKRD13CQ8N6S4 541 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 UBR7Q8N806 425 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 GSTCDQ8NEC7 633 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 TTC8Q8TAM2 541 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SLC7A14Q8TBB6 771 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 PIP4K2CQ8TBX8 421 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 DDX1Q92499 740 aaKnown RBP2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 MAP4K1Q92918 833 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 PEX11GQ96HA9 241 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ABHD8Q96I13 439 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 C12orf42Q96LP6 360 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 TTC1Q99614 292 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ARPC5LQ9BPX5 153 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SELENOOQ9BVL4 669 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CD244Q9BZW8 370 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CPVLQ9H3G5 476 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 RPAP3Q9H6T3 665 aaPredicted RBP2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 IPPKQ9H8X2 491 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 LUC7LQ9NQ29 371 aaKnown RBP2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CASS4Q9NQ75 786 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CATSPERZQ9NTU4 200 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 FLRT1Q9NZU1 646 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 KLHL14Q9P2G3 628 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CLIP2Q9UDT6 1046 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ZNF180Q9UJW8 692 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 GTF2A1LQ9UNN4 478 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 AGTPBP1Q9UPW5 1226 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 PTPN22Q9Y2R2 807 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 TMX2Q9Y320 296 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 PCDHB4Q9Y5E5 795 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ROBO3Q96MS0 1386 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ZSWIM8A7E2V4 1837 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ECM29Q5VYK3 1845 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 RLFQ13129 1914 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 AK9Q5TCS8 1911 aa2.95□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ASTN1O14525 1302 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ZNF536O15090 1300 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CCDC171Q6TFL3 1326 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 DDX60LQ5H9U9 1706 aaKnown RBP2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 C19orf81C9J6K1 198 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 NPIPB6E9PJ23 425 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 MPHOSPH10O00566 681 aaKnown RBP2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 AQP7O14520 342 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SLC27A2O14975 620 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ADAMTS3O15072 1205 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ZEB2O60315 1214 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 RANBP6O60518 1105 aaKnown RBP2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 RFPL1O75677 317 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 EYA4O95677 639 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SCGB1D2O95969 90 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SOD2P04179 222 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ASLP04424 464 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 HLA-DOAP06340 250 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 C1QTNF9P0C862 333 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 GNAT2P19087 354 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 EN2P19622 333 aaPredicted RBP2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 POU3F2P20265 443 aaPredicted RBP2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 DDIT3P35638 169 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SLC16A2P36021 539 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 RAP1GAPP47736 663 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CCT5P48643 541 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 TDO2P48775 406 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 MAPKAPK2P49137 400 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 FLT3LGP49771 235 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 RAB27AP51159 221 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SCNN1BP51168 640 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CDR1P51861 262 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 HERVK_113P62684 666 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 GABREP78334 506 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 DLG4P78352 724 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ICA1Q05084 483 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 PRKCZQ05513 592 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 GRIN1Q05586 938 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 MCL1Q07820 350 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SREBF2Q12772 1141 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 PIN1Q13526 163 aaPredicted RBP2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 NR1I3Q14994 352 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 NECTIN1Q15223 517 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 SEC23AQ15436 765 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 CCL14Q16627 93 aa2.94□□□□□ -1.94
TNFRSF1A-210ENST00000537842 ADCK5Q3MIX3 580 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms