RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 RNASELQ05823 741 aaKnown RBP16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 UPP1Q16831 310 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 ZNF667Q5HYK9 610 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 WDR59Q6PJI9 974 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 FAM43BQ6ZT52 329 aaPredicted RBP16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 COLGALT2Q8IYK4 626 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 LRRC52Q8N7C0 313 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 CCDC150Q8NCX0 1101 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 SPAG5Q96R06 1193 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 DNAJC7Q99615 494 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 STK33Q9BYT3 514 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 NRDE2Q9H7Z3 1164 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 ACP6Q9NPH0 428 aa16.8■□□□□ 0.28
SFSWAP-206ENST00000537582 TDRD15B5MCY1 1934 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 GFPT2O94808 682 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 KIF4AO95239 1232 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 TPM1P09493 284 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 CD58P19256 250 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 ACO1P21399 889 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 KCNJ6P48051 423 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 GSDMDP57764 484 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 LILRA4P59901 499 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 GCNT1Q02742 428 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 TMEM139Q8IV31 216 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 CNGA4Q8IV77 575 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 LRRC8AQ8IWT6 810 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 TAF4BQ92750 862 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 LBHD1Q9BQE6 289 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 EDEM3Q9BZQ6 932 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 VRTNQ9H8Y1 702 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 PRG3Q9Y2Y8 225 aaPredicted RBP16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 SNX9Q9Y5X1 595 aa16.79■□□□□ 0.28
SFSWAP-206ENST00000537582 HOXA2O43364 376 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 EFCAB14O75071 495 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 STAU1O95793 577 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 PLEKP08567 350 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 SKILP12757 684 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 USP8P40818 1118 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 TAF6P49848 677 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 MFAP3P55082 362 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 MYO1EQ12965 1108 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 PSRC1Q6PGN9 363 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 UBR7Q8N806 425 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 ZNF397Q8NF99 534 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 OR8K1Q8NGG5 319 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 SHC3Q92529 594 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 IQCDQ96DY2 449 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 MMS19Q96T76 1030 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 CHP1Q99653 195 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 RC3H2Q9HBD1 1191 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 HMGXB4Q9UGU5 601 aa16.78■□□□□ 0.28
SFSWAP-206ENST00000537582 KPNA7A9QM74 516 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 HCRTO43612 131 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 B3GAT3O94766 335 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 RFX1P22670 979 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 SOX5P35711 763 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 BRCC3P46736 316 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 OR1G1P47890 313 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 SLC11A1P49279 550 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 TNNC1P63316 161 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 ORC1Q13415 861 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 C9orf50Q5SZB4 431 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 ZNF689Q96CS4 500 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 PANX2Q96RD6 677 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 MRPL45Q9BRJ2 306 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 BCO2Q9BYV7 579 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 KANSL3Q9P2N6 904 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 NME7Q9Y5B8 376 aa16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 FNDC1Q4ZHG4 1894 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 LAMA2P24043 3122 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-206ENST00000537582 NT5C1B-RDH14C9J2C7 533 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 CYP26A1O43174 497 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 KRT5P13647 590 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 RPL9P32969 192 aaKnown RBP16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 STAT1P42224 750 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 CCZ1BP86790 482 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 CCZ1P86791 482 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 ASIC2Q16515 512 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 SOWAHAQ2M3V2 549 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 SV2CQ496J9 727 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 TIGD5Q53EQ6 642 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 SFMBT2Q5VUG0 894 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 IRF2BP2Q7Z5L9 587 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 TMEM173Q86WV6 379 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 LRRC43Q8N309 656 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 HERVK_113Q902F9 699 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 FAM193BQ96PV7 902 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 CISHQ9NSE2 258 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 L1RE1Q9UN81 338 aa16.77■□□□□ 0.27
SFSWAP-206ENST00000537582 TBXAS1P24557 533 aaPredicted RBP16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 PNPLA4P41247 253 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 BCAR1P56945 870 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 MTF1Q14872 753 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 MEA1Q16626 185 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
SFSWAP-206ENST00000537582 HGSNATQ68CP4 663 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms