RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 VAV1P15498 845 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PTK2Q05397 1052 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CBX3Q13185 183 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TNFAIP8L3Q5GJ75 292 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SFR1Q86XK3 245 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 RNF169Q8NCN4 708 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF280CQ8ND82 737 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SCG3Q8WXD2 468 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 COA7Q96BR5 231 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TRIM11Q96F44 468 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CEP19Q96LK0 163 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 OSBPL8Q9BZF1 889 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 MYLK2Q9H1R3 596 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CNOT8Q9UFF9 292 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SUN2Q9UH99 717 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ANAPC7Q9UJX3 599 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 ARHGAP26Q9UNA1 814 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 NWD1Q149M9 1564 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SFI1A8K8P3 1242 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 GAS7O60861 476 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 DAB1O75553 588 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PSMG1O95456 288 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TMEM253P0C7T8 217 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TRPC1P48995 793 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PMS1P54277 932 aaKnown RBP5.68□□□□□ -1.5
PTPRD-213ENST00000537002 RIPPLY1Q0D2K3 151 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 CEP55Q53EZ4 464 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SPOPLQ6IQ16 392 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 TPTE2Q6XPS3 522 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 AGR3Q8TD06 166 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 SPATA7Q9P0W8 599 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 PRKAG3Q9UGI9 489 aa5.68□□□□□ -1.5
PTPRD-213ENST00000537002 RSPH10B2B2RC85 870 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 NMT2O60551 498 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TGDSO95455 350 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 RSPH10BP0C881 870 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PORP16435 677 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ALDH1B1P30837 517 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PPARGP37231 505 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 MCAMP43121 646 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 MRPS15P82914 257 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ATP1A4Q13733 1029 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 FSCBQ5H9T9 825 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 LVRNQ6Q4G3 990 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 NEK10Q6ZWH5 1172 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DQX1Q8TE96 717 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DIS3LQ8TF46 1054 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 KAZALD1Q96I82 304 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 BTBD10Q9BSF8 475 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PACSIN1Q9BY11 444 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DMTF1Q9Y222 760 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 RNF103-CHMP3A0A140T963 221 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 GOLGA8IPA6NC78 632 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 GOLGA8JA6NMD2 632 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 CLDN3O15551 220 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 INPP1P49441 399 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 HADHBP55084 474 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 MTTPP55157 894 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ADARP55265 1226 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 SMYD5Q6GMV2 418 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PATL1Q86TB9 770 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DDHD1Q8NEL9 900 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PLGRKTQ9HBL7 147 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 GIMAP4Q9NUV9 329 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ADA2Q9NZK5 511 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DKK3Q9UBP4 350 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ERVV-2B6SEH9 535 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 IL1BP01584 269 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 IGKV5-2P06315 115 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DRAP1Q14919 205 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 GLG1Q92896 1179 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 STRBPQ96SI9 672 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 POLR3CQ9BUI4 534 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 SHCBP1LQ9BZQ2 653 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 SLC13A1Q9BZW2 595 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 CCDC90BQ9GZT6 254 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 UPF3AQ9H1J1 476 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 UBAP1Q9NZ09 502 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 CLEC11AQ9Y240 323 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 DTNAQ9Y4J8 743 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PCDHB4Q9Y5E5 795 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 RIMBP2O15034 1052 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 BAIAP3O94812 1187 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 NR3C1P04150 777 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 CCDC159P0C7I6 412 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 UBXN2AP68543 259 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 STK4Q13043 487 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 AUHQ13825 339 aaKnown RBP5.67□□□□□ -1.5
PTPRD-213ENST00000537002 POTEAQ6S8J7 498 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 PCGF5Q86SE9 256 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TMPRSS6Q8IU80 811 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 RELL1Q8IUW5 271 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 SLC25A41Q8N5S1 370 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 ALLCQ8N6M5 410 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 HES6Q96HZ4 224 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 TBC1D10AQ9BXI6 508 aa5.67□□□□□ -1.5
PTPRD-213ENST00000537002 RBM47A0AV96 593 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms