RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SMURF1Q9HCE7 757 aa7.89□□□□□ -1.15
CCDC60-203ENST00000536742 HYPKQ9NX55 129 aa7.89□□□□□ -1.15
CCDC60-203ENST00000536742 CHPF2Q9P2E5 772 aa7.89□□□□□ -1.15
CCDC60-203ENST00000536742 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-203ENST00000536742 B4GALT6Q9UBX8 382 aa7.89□□□□□ -1.15
CCDC60-203ENST00000536742 MBD1Q9UIS9 605 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-203ENST00000536742 MTUS1Q9ULD2 1270 aa7.89□□□□□ -1.15
CCDC60-203ENST00000536742 ATP23Q9Y6H3 246 aa7.89□□□□□ -1.15
CCDC60-203ENST00000536742 RALGAPA2Q2PPJ7 1873 aa7.89□□□□□ -1.15
CCDC60-203ENST00000536742 USP9XQ93008 2570 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-203ENST00000536742 ZZEF1O43149 2961 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 COL11A1P12107 1806 aaPredicted RBP7.88□□□□□ -1.15
CCDC60-203ENST00000536742 SIP14410 1827 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 MYOCOSA0A1B0GUC4 107 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 ENTPD3O75355 529 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 AMY2AP04746 511 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 CPEP16870 476 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 AMY2BP19961 511 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 ADORA2AP29274 412 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 BACE1P56817 501 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 ZNF200P98182 395 aaPredicted RBP7.88□□□□□ -1.15
CCDC60-203ENST00000536742 ANGPT1Q15389 498 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 DHCR24Q15392 516 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 TCEAL5Q5H9L2 206 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 CDC42EP5Q6NZY7 148 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 RPAINQ86UA6 219 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 OSTM1Q86WC4 334 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 C1QL4Q86Z23 238 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 SCYL1Q96KG9 808 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 MYD88Q99836 296 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 YIPF4Q9BSR8 244 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 BRINP2Q9C0B6 783 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 WNT8AQ9H1J5 351 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 CNTD2Q9H8S5 307 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 DTLQ9NZJ0 730 aa7.88□□□□□ -1.15
CCDC60-203ENST00000536742 ZNF236Q9UL36 1845 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 MAN2B1O00754 1011 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 SLC27A2O14975 620 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 N4BP3O15049 544 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 NUAK1O60285 661 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 HIP1RO75146 1068 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 BAIAP3O94812 1187 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 CST5P28325 142 aaPredicted RBP7.87□□□□□ -1.15
CCDC60-203ENST00000536742 RFC2P35250 354 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 JAM2P57087 298 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 OCRLQ01968 901 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 TUSC3Q13454 348 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 CLUL1Q15846 466 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 DCLK2Q8N568 766 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 CISD2Q8N5K1 135 aaKnown RBP7.87□□□□□ -1.15
CCDC60-203ENST00000536742 OR2W6PQ8NHA6 318 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 SH3RF2Q8TEC5 729 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 MZB1Q8WU39 189 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 DDX11Q96FC9 970 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 TOE1Q96GM8 510 aaKnown RBP7.87□□□□□ -1.15
CCDC60-203ENST00000536742 HNRNPABQ99729 332 aaKnown RBP7.87□□□□□ -1.15
CCDC60-203ENST00000536742 RXFP1Q9HBX9 757 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 BABAM1Q9NWV8 329 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 CD207Q9UJ71 328 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 NUDCQ9Y266 331 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 ZKSCAN5Q9Y2L8 839 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 PCDHA5Q9Y5H7 936 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 OTOGLQ3ZCN5 2332 aa7.87□□□□□ -1.15
CCDC60-203ENST00000536742 SALL1Q9NSC2 1324 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 SYNRGQ9UMZ2 1314 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 FRYQ5TBA9 3013 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 TCRBV5S4A2TA0A5A2 114 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 LCHNA4D1U4 455 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 KPNA6O60684 536 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 GAS7O60861 476 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 FRAT2O75474 233 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-203ENST00000536742 F2P00734 622 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 ASGR1P07306 291 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 ASGR2P07307 311 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 PMLP29590 882 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 SCNN1BP51168 640 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 DLG4P78352 724 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 LCNL1Q6ZST4 164 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 FILIP1Q7Z7B0 1213 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 DEFB128Q7Z7B8 93 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 PTRH1Q86Y79 214 aaKnown RBP7.86□□□□□ -1.15
CCDC60-203ENST00000536742 UBALD2Q8IYN6 164 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 RAD9AQ99638 391 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 USP40Q9NVE5 1235 aa7.86□□□□□ -1.15
CCDC60-203ENST00000536742 CDK5RAP2Q96SN8 1893 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 LINC01553A4QN01 128 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 ANKRD62A6NC57 917 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 CNMDO75829 334 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 EYA4O95677 639 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 KRT15P19012 456 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 GYG1P46976 350 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 LINC00310P59036 64 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 NKX3-2P78367 333 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 CHAF1AQ13111 956 aaPredicted RBP7.85□□□□□ -1.15
CCDC60-203ENST00000536742 SART3Q15020 963 aaKnown RBP7.85□□□□□ -1.15
CCDC60-203ENST00000536742 CT47A1Q5JQC4 288 aaPredicted RBP7.85□□□□□ -1.15
CCDC60-203ENST00000536742 B3GNT8Q7Z7M8 397 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 NOSTRINQ8IVI9 506 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 CCDC105Q8IYK2 499 aa7.85□□□□□ -1.15
CCDC60-203ENST00000536742 SHCBP1Q8NEM2 672 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms