RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 M0R296 226 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CCL16O15467 120 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ZNF202O95125 648 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SLFN14P0C7P3 912 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 GARTP22102 1010 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 WNT7BP56706 349 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CTXN3Q4LDR2 81 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 C9orf57Q5W0N0 161 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ZNF280DQ6N043 979 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 EFCAB13Q8IY85 973 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 APPL2Q8NEU8 664 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SAAL1Q96ER3 474 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ASIC4Q96FT7 647 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CCDC34Q96HJ3 373 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 MYADMQ96S97 322 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CBWD1Q9BRT8 395 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SMOC2Q9H3U7 446 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 TMEM206Q9H813 350 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ANO9A1A5B4 782 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 PIRO00625 290 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 HOXD13P35453 343 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 LILRA4P59901 499 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 EHHADHQ08426 723 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 MTMR3Q13615 1198 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 BMP8AQ7Z5Y6 402 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 GRASPQ7Z6J2 395 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 FMR1NBQ8N0W7 255 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 FAM213AQ9BRX8 229 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 BLZF1Q9H2G9 400 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SERTAD1Q9UHV2 236 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 TIMM13Q9Y5L4 95 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SPTLC1O15269 473 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ACTN4O43707 911 aaKnown RBP19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 POU2F2P09086 479 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ATF2P15336 505 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 GBP2P32456 591 aaPredicted RBP19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ARPP19P56211 112 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 NTHL1P78549 312 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 UNC13DQ70J99 1090 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 RTL10Q7L3V2 364 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 GET4Q7L5D6 327 aaPredicted RBP19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 EPM2AIP1Q7L775 607 aaPredicted RBP19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 BRSK2Q8IWQ3 736 aa19.34■□□□□ 0.69
TNFRSF1A-209ENST00000536717 OAZ2O95190 189 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 IL18RAPO95256 599 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 LDHAP00338 332 aaKnown RBP19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 AFMP43652 599 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 YWHAHQ04917 246 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 SNW1Q13573 536 aaKnown RBP19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CUL4BQ13620 913 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 FAM26FQ5R3K3 315 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 DSTYKQ6XUX3 929 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 KRBA2Q6ZNG9 492 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 STXBP4Q6ZWJ1 553 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PCIF1Q9H4Z3 704 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 KCNK12Q9HB15 430 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 DPP3Q9NY33 737 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 EPS15L1Q9UBC2 864 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 POLIQ9UNA4 740 aa19.33■□□□□ 0.68
TNFRSF1A-209ENST00000536717 GOLGA8IPA6NC78 632 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 GOLGA8JA6NMD2 632 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 EIF3DO15371 548 aaKnown RBP eCLIP19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 KINO60870 393 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 XYLBO75191 536 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 SEC24AO95486 1093 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TPGS2Q68CL5 300 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ARMCX5Q6P1M9 558 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 NT5DC4Q86YG4 428 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 UBALD2Q8IYN6 164 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 GRAMD1CQ8IYS0 662 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ZNF507Q8TCN5 953 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 SENP8Q96LD8 212 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 HCFC1R1Q9NWW0 138 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 HCN4Q9Y3Q4 1203 aa19.32■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ARHGEF37A1IGU5 675 aa19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 EXTL3O43909 919 aa19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TYMPP19971 482 aa19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TCEAL8Q8IYN2 117 aa19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PBXIP1Q96AQ6 731 aa19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 TIGD1Q96MW7 591 aa19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 RBAKQ9NYW8 714 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 DNMT3BQ9UBC3 853 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PVALEFA0A1B0GWK0 134 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 LAMP2P13473 410 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 FSHRP23945 695 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 ELF1P32519 619 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 USP37Q86T82 979 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 GPD1LQ8N335 351 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 SCFD1Q8WVM8 642 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 RSAD2Q8WXG1 361 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PAGE5Q96GU1 130 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 CYP4F11Q9HBI6 524 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 IGSF9Q9P2J2 1179 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 AFF4Q9UHB7 1163 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 PRRG1O14668 218 aa19.3■□□□□ 0.68
TNFRSF1A-209ENST00000536717 KIAA0391O15091 583 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms