RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 COL20A1Q9P218 1284 aa6.55□□□□□ -1.36
PRKDC-208ENST00000536710 PCDHGB2Q9Y5G2 931 aa6.55□□□□□ -1.36
PRKDC-208ENST00000536710 PRSS29PA6NIE9 313 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 M0QYG6 137 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 MFAP3LO75121 409 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 IPO13O94829 963 aaKnown RBP6.54□□□□□ -1.36
PRKDC-208ENST00000536710 ABHD16AO95870 558 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 HK1P19367 917 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 SLC6A2P23975 617 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 CNR2P34972 360 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 PPM1AP35813 382 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 EPHB4P54760 987 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 MXRA7P84157 204 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 CTBP1Q13363 440 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 PMS2P11Q13670 270 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 SLFN13Q68D06 897 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 ERAP2Q6P179 960 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 MED25Q71SY5 747 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 PDSS2Q86YH6 399 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 LRRC56Q8IYG6 542 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-208ENST00000536710 SLC17A8Q8NDX2 589 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 NMD3Q96D46 503 aaKnown RBP6.54□□□□□ -1.36
PRKDC-208ENST00000536710 MSLNLQ96KJ4 702 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 TOX2Q96NM4 488 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 BRIP1Q9BX63 1249 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 IMPG2Q9BZV3 1241 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 ADAM7Q9H2U9 754 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 PLA2G3Q9NZ20 509 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 CLCA2Q9UQC9 943 aa6.54□□□□□ -1.36
PRKDC-208ENST00000536710 TRIM43BA6NCK2 446 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 NPEPPSL1A6NEC2 478 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 TRIM13O60858 407 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 NBNO60934 754 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 GRPP07492 148 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 MSX2P35548 267 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-208ENST00000536710 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 CRB2Q5IJ48 1285 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 DGKKQ5KSL6 1271 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 TXLNBQ8N3L3 684 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 D2HGDHQ8N465 521 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 SLC15A4Q8N697 577 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 DNAJC5GQ8N7S2 189 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 ATP11CQ8NB49 1132 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 MAML1Q92585 1016 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 TRIM43Q96BQ3 446 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-208ENST00000536710 IQCDQ96DY2 449 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 ZNF518BQ9C0D4 1074 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 WDR12Q9GZL7 423 aaKnown RBP6.53□□□□□ -1.36
PRKDC-208ENST00000536710 TINAGL1Q9GZM7 467 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-208ENST00000536710 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 ITGB1BP2Q9UKP3 347 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 MAGED2Q9UNF1 606 aaPredicted RBP6.53□□□□□ -1.36
PRKDC-208ENST00000536710 SH3BP1Q9Y3L3 701 aa6.53□□□□□ -1.36
PRKDC-208ENST00000536710 FGF18O76093 207 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 ANXA1P04083 346 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 THP07101 528 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 INHBBP09529 407 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 HARSP12081 509 aaKnown RBP6.52□□□□□ -1.37
PRKDC-208ENST00000536710 BMP7P18075 431 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 MGAT1P26572 445 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 TECP42680 631 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 POU6F2P78424 691 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-208ENST00000536710 GRM1Q13255 1194 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 ARL13BQ3SXY8 428 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 USP37Q86T82 979 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 SYTL1Q8IYJ3 562 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 ANKRD42Q8N9B4 389 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 TMIEQ8NEW7 156 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 OR10H5Q8NGA6 315 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 ZSCAN18Q8TBC5 510 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-208ENST00000536710 FEZF2Q8TBJ5 459 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 BRI3BPQ8WY22 251 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 DDX17Q92841 729 aaKnown RBP6.52□□□□□ -1.37
PRKDC-208ENST00000536710 SCAMP4Q969E2 229 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 SNX22Q96L94 193 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 STK31Q9BXU1 1019 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 CPEB1Q9BZB8 566 aaKnown RBP6.52□□□□□ -1.37
PRKDC-208ENST00000536710 DPH1Q9BZG8 443 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 SIK2Q9H0K1 926 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 SMURF2Q9HAU4 748 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 SERHLQ9NQF3 203 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 TMX2Q9Y320 296 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 PLEKHM1Q9Y4G2 1056 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 DUSP10Q9Y6W6 482 aa6.52□□□□□ -1.37
PRKDC-208ENST00000536710 TMEM233B4DJY2 109 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 RASSF9O75901 435 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 DNAJB5O75953 348 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 C8AP07357 584 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 SLC11A2P49281 568 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 CHN2P52757 468 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 UCP3P55916 312 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 HHEXQ03014 270 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 FOXL1Q12952 345 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 STARD3Q14849 445 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 AMOTQ4VCS5 1084 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 INO80DQ53TQ3 878 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-208ENST00000536710 GPRIN1Q7Z2K8 1008 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 FAM46DQ8NEK8 389 aa6.51□□□□□ -1.37
PRKDC-208ENST00000536710 ATXN2LQ8WWM7 1075 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms