RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 EXTL3O43909 919 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 ABLIM3O94929 683 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 OR4Q2P0C623 313 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 POU5F1Q01860 360 aaKnown RBP15.45■□□□□ 0.06
UBE3B-206ENST00000536398 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
UBE3B-206ENST00000536398 CYP26C1Q6V0L0 522 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 APPL2Q8NEU8 664 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 ZNF461Q8TAF7 563 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 SENP8Q96LD8 212 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 PDE11AQ9HCR9 933 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 HCFC1R1Q9NWW0 138 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 RBAKQ9NYW8 714 aaPredicted RBP15.45■□□□□ 0.06
UBE3B-206ENST00000536398 POLIQ9UNA4 740 aa15.45■□□□□ 0.06
UBE3B-206ENST00000536398 DOCK6Q96HP0 2047 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 ANK1P16157 1881 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 FAM237AA0A1B0GTK4 181 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 CLIC2O15247 247 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 EIF3DO15371 548 aaKnown RBP eCLIP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 OAZ2O95190 189 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 IL18RAPO95256 599 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 VNN2O95498 520 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 LDHAP00338 332 aaKnown RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 HNRNPA1P09651 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 GBP2P32456 591 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 SYKP43405 635 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 CDR1P51861 262 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 TFAMQ00059 246 aaKnown RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 YWHAHQ04917 246 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 STK4Q13043 487 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 LMBRD2Q68DH5 695 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 ZNF280DQ6N043 979 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 HFE2Q6ZVN8 426 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 STXBP4Q6ZWJ1 553 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 OTOP3Q7RTS5 596 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 CBWD2Q8IUF1 395 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 GPD1LQ8N335 351 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 FSIP1Q8NA03 581 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 ACSF2Q96CM8 615 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 BORCS6Q96GS4 357 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 TMEM209Q96SK2 561 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 PYM1Q9BRP8 204 aaKnown RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 HSPBP1Q9NZL4 362 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 ATP6V1DQ9Y5K8 247 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.44■□□□□ 0.06
UBE3B-206ENST00000536398 DENND4AQ7Z401 1863 aa15.44■□□□□ 0.06
UBE3B-206ENST00000536398 PRR33A8MZF0 331 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 UVSSAQ2YD98 709 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 KMT5BQ4FZB7 885 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 RNF19BQ6ZMZ0 732 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 TRIM67Q6ZTA4 783 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 GET4Q7L5D6 327 aaPredicted RBP15.43■□□□□ 0.06
UBE3B-206ENST00000536398 PLCD3Q8N3E9 789 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 RDH13Q8NBN7 331 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 CXorf38Q8TB03 319 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 RSAD2Q8WXG1 361 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 PGLYRP2Q96PD5 576 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 CYP4F11Q9HBI6 524 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 AGPAT3Q9NRZ7 376 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 DNMT3BQ9UBC3 853 aaKnown RBP15.43■□□□□ 0.06
UBE3B-206ENST00000536398 MYO10Q9HD67 2058 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 TECTAO75443 2155 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 TCHHQ07283 1943 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
UBE3B-206ENST00000536398 A0A1W2PQ27 194 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 A0A1W2PQ64 194 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 A0A1W2PQD8 194 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 TMEM221A6NGB7 291 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 M0R296 226 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 PRRG1O14668 218 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 ATF2P15336 505 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 TYMPP19971 482 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 FSHRP23945 695 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 HOXA9P31269 272 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 ELF1P32519 619 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 CYP2J2P51589 502 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 ADCY1Q08828 1119 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 OVOS1Q6IE37 1185 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 USP37Q86T82 979 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 TCEAL8Q8IYN2 117 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 C1orf127Q8N9H9 656 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 KIAA0895Q8NCT3 520 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 ITFG1Q8TB96 612 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 CRISPLD1Q9H336 500 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 KCNK12Q9HB15 430 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 USP25Q9UHP3 1055 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 AGAP1Q9UPQ3 857 aa15.42■□□□□ 0.06
UBE3B-206ENST00000536398 SCN1AP35498 2009 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 ARHGEF37A1IGU5 675 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 CYB561D2O14569 222 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 ITGB3P05106 788 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 CPB1P15086 417 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 POLR2BP30876 1174 aaKnown RBP15.41■□□□□ 0.06
UBE3B-206ENST00000536398 TAF6P49848 677 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 SIGLEC14Q08ET2 396 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 BMT2Q1RMZ1 405 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 WSCD1Q658N2 575 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 POTEHQ6S545 545 aa15.41■□□□□ 0.06
UBE3B-206ENST00000536398 NT5DC4Q86YG4 428 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms