RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 LTB4R2Q9NPC1 389 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 NCDNQ9UBB6 729 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 TUBGCP4Q9UGJ1 667 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 FBXO4Q9UKT5 387 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 SPTLC1O15269 473 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 SP9P0CG40 484 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 CEBPBP17676 345 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 PSMC3P17980 439 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 LRPAP1P30533 357 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 NRLP54845 237 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 SPAG1Q07617 926 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 TMEM132DQ14C87 1099 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 ZNF528Q3MIS6 628 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 TMEM119Q4V9L6 283 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 TAS1R3Q7RTX0 852 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 GPR161Q8N6U8 529 aaKnown RBP14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 RUBCNQ92622 972 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 MSANTD3Q96H12 275 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 KIF2CQ99661 725 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 IER2Q9BTL4 223 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 ASB3Q9Y575 518 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 R4GN57 208 aa14.37□□□□□ -0.11
CLSTN3-205ENST00000535452 NPHP3-ACAD11A0A0J9YXS1 232 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 PLCG1P19174 1290 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 TYMPP19971 482 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 SDHBP21912 280 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 GDI1P31150 447 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 TUFMP49411 452 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 CSTF1Q05048 431 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 MRPL58Q14197 206 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 MYBPC2Q14324 1141 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 PTPAQ15257 358 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 SF3A1Q15459 793 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 STXBP4Q6ZWJ1 553 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 ERMP1Q7Z2K6 904 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 SYCP3Q8IZU3 236 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 POMGNT1Q8WZA1 660 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 RAD54LQ92698 747 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 EXOC4Q96A65 974 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 HVCN1Q96D96 273 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 ZNF560Q96MR9 790 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 PGLYRP2Q96PD5 576 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 ASB7Q9H672 318 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 HEBP1Q9NRV9 189 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 DERAQ9Y315 318 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 YIPF1Q9Y548 306 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 PCDHGA2Q9Y5H1 932 aa14.36□□□□□ -0.11
CLSTN3-205ENST00000535452 TTC26A0AVF1 554 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 LACTBL1A8MY62 500 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 M0QZQ0 153 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 OAZ2O95190 189 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 GLULP15104 373 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 DDIT3P35638 169 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 KPNA1P52294 538 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 SMARCB1Q12824 385 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 GPR17Q13304 367 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 LRRC32Q14392 662 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 GRM2Q14416 872 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 MCM6Q14566 821 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 KARSQ15046 597 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 SLC5A9Q2M3M2 681 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 MGAT5BQ3V5L5 792 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 FAM78AQ5JUQ0 283 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 RRAGBQ5VZM2 374 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 TANGO2Q6ICL3 276 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 CCDC73Q6ZRK6 1079 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 SV2BQ7L1I2 683 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 ZSCAN18Q8TBC5 510 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 FAM3CQ92520 227 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 SEPT5Q99719 369 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 FAM126AQ9BYI3 521 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 LRRC27Q9C0I9 530 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 MRPL44Q9H9J2 332 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 THG1LQ9NWX6 298 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 SEL1LQ9UBV2 794 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 ZMYM5Q9UJ78 669 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 GMEB2Q9UKD1 530 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 AGO2Q9UKV8 859 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 TIMM13Q9Y5L4 95 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 TRIOO75962 3097 aa14.35□□□□□ -0.11
CLSTN3-205ENST00000535452 ABLIM1O14639 778 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 IL18RAPO95256 599 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 SEC24AO95486 1093 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 LDHAP00338 332 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 PIGRP01833 764 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 GAP43P17677 238 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 PNPLA4P41247 253 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 RPS9P46781 194 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 TAF6P49848 677 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 DUSP4Q13115 394 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 SV2CQ496J9 727 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 SPATA1Q5VX52 437 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 RNF19BQ6ZMZ0 732 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 NT5DC4Q86YG4 428 aa14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 DCP1BQ8IZD4 617 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 C2orf15Q8WU43 125 aaKnown RBP14.34□□□□□ -0.11
CLSTN3-205ENST00000535452 CACTINQ8WUQ7 758 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms