RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 NOTCH4Q99466 2003 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 OR6C75A6NL08 312 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 ANKRD63C9JTQ0 380 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 K7ELQ4 463 aaPredicted RBP17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 GAP43P17677 238 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 PAX3P23760 479 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 ACOT2P49753 483 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 PFKPQ01813 784 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 TWF1Q12792 350 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 TMEM132DQ14C87 1099 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 CYP4A22Q5TCH4 519 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 PDZD4Q76G19 769 aaPredicted RBP17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 HVCN1Q96D96 273 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 ASB7Q9H672 318 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 MRPL44Q9H9J2 332 aaKnown RBP17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 SEL1LQ9UBV2 794 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 AGO2Q9UKV8 859 aaKnown RBP17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 SIT1Q9Y3P8 196 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 USP34Q70CQ2 3546 aa17.56■□□□□ 0.4
CLSTN3-204ENST00000535313 MYMKA6NI61 221 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 STX6O43752 255 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 ECI2O75521 394 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 MICAL2O94851 1124 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 NFICP08651 508 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 CEBPBP17676 345 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 TYMPP19971 482 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 NBL1P41271 181 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 STAT6P42226 847 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 LILRA4P59901 499 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 SLC39A14Q15043 492 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 POSTNQ15063 836 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 ANGPT1Q15389 498 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 OVOS1Q6IE37 1185 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 RNF19BQ6ZMZ0 732 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 POMGNT1Q8WZA1 660 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 USP28Q96RU2 1077 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 EXOC7Q9UPT5 735 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 STYXL1Q9Y6J8 313 aa17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 MORC2Q9Y6X9 1032 aaPredicted RBP17.55■□□□□ 0.4
CLSTN3-204ENST00000535313 TISP43B9A030 160 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 ODC1P11926 461 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 STARD6P59095 220 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 POU5F1Q01860 360 aaKnown RBP17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 PLD1Q13393 1074 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 SNW1Q13573 536 aaKnown RBP17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 SLC44A4Q53GD3 710 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 PRSS36Q5K4E3 855 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 C9orf57Q5W0N0 161 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 LEMD2Q8NC56 503 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 SENP8Q96LD8 212 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 PGLYRP2Q96PD5 576 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 ACCSQ96QU6 501 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 ASAH2Q9NR71 780 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 TBC1D7Q9P0N9 293 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 C2CD2Q9Y426 696 aa17.54■□□□□ 0.4
CLSTN3-204ENST00000535313 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 PIRO00625 290 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 PPEF2O14830 753 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 PPP1R37O75864 691 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 GCNT3O95395 438 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 DCNP07585 359 aaKnown RBP17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 OR4Q2P0C623 313 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 IDEP14735 1019 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 PRKCQQ04759 706 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 GPR17Q13304 367 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 MYBPC2Q14324 1141 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 STK38Q15208 465 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 MLF2Q15773 248 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 ARMCX5Q6P1M9 558 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 ELSPBP1Q96BH3 223 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 DNAJC19Q96DA6 116 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 TCEAL4Q96EI5 215 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 FOXQ1Q9C009 403 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 CEP72Q9P209 647 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 YIPF1Q9Y548 306 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 PCDHB13Q9Y5F0 798 aa17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 PTPRZ1P23471 2315 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-204ENST00000535313 MYO15AQ9UKN7 3530 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 RIF1Q5UIP0 2472 aaKnown RBP17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 TULP1O00294 542 aaPredicted RBP17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 IL18RAPO95256 599 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 MYL4P12829 197 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 NASPP49321 788 aaPredicted RBP17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 EPHB3P54753 998 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 DUSP4Q13115 394 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 L1TD1Q5T7N2 865 aaKnown RBP17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 TANGO2Q6ICL3 276 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 FRMD5Q7Z6J6 570 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 HS6ST3Q8IZP7 471 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 SYCP3Q8IZU3 236 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 PJA1Q8NG27 643 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 STRA6Q9BX79 667 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 ZFP14Q9HCL3 533 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 DPP3Q9NY33 737 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 DSEQ9UL01 958 aa17.52■□□□□ 0.4
CLSTN3-204ENST00000535313 KANSL1LA0AUZ9 987 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 ANO9A1A5B4 782 aa17.51■□□□□ 0.39
CLSTN3-204ENST00000535313 SPTLC1O15269 473 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms