RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 ZNRF3Q9ULT6 936 aa13.25□□□□□ -0.29
SPG11-203ENST00000535302 MYMKA6NI61 221 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 RASSF10A6NK89 507 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 XPO1O14980 1071 aaKnown RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 ZFXP17010 805 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 ZNF543Q08ER8 600 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 USP49Q70CQ1 688 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 NLRP14Q86W24 1093 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 GIMAP4Q9NUV9 329 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 MAP3K20Q9NYL2 800 aaKnown RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 AIM2O14862 343 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 APOA4P06727 396 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 MYBL1P10243 752 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 ITPRIPL1Q6GPH6 555 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 SH2D3CQ8N5H7 860 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 KAT2BQ92831 832 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 TRIM54Q9BYV2 358 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 PRR12Q9ULL5 1215 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 FHOD1Q9Y613 1164 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 RTN2O75298 545 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 SKAP2O75563 359 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 OR1G1P47890 313 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 PRKCEQ02156 737 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 C4orf33Q8N1A6 199 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 ZKSCAN4Q969J2 545 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 MTBPQ96DY7 904 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 BPIFA3Q9BQP9 254 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 NCOA4Q13772 614 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 TCEA2Q15560 299 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 CNGA3Q16281 694 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 TADA2BQ86TJ2 420 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 GUF1Q8N442 669 aaKnown RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 BFARQ9NZS9 450 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 PLOD1Q02809 727 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 GLRA4Q5JXX5 417 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 RFFLQ8WZ73 363 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 JADE3Q92613 823 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 NCF1BA6NI72 391 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 NCF1CA8MVU1 366 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 NCF1P14598 390 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 PIK3R5Q8WYR1 880 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 ZNF560Q96MR9 790 aa13.24□□□□□ -0.29
SPG11-203ENST00000535302 EPB41L4AQ9HCS5 686 aaPredicted RBP13.24□□□□□ -0.29
SPG11-203ENST00000535302 PRRG1O14668 218 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 LZTS3O60299 673 aaPredicted RBP13.23□□□□□ -0.29
SPG11-203ENST00000535302 TBC1D12O60347 775 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 EFCAB12Q6NXP0 572 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 HEATR4Q86WZ0 1026 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 SLC7A14Q8TBB6 771 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 XPO7Q9UIA9 1087 aaKnown RBP13.23□□□□□ -0.29
SPG11-203ENST00000535302 N6AMT1Q9Y5N5 214 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 ABCC3O15438 1527 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 MAP3K6O95382 1288 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 NPTXRO95502 500 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 GMPSP49915 693 aaPredicted RBP13.23□□□□□ -0.29
SPG11-203ENST00000535302 FGD2Q7Z6J4 655 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 FRMD5Q7Z6J6 570 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 STX19Q8N4C7 294 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 RBBP8NLQ8NC74 664 aaPredicted RBP13.23□□□□□ -0.29
SPG11-203ENST00000535302 TUFT1Q9NNX1 390 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 LATS2Q9NRM7 1088 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 C20orf96Q9NUD7 363 aaPredicted RBP13.23□□□□□ -0.29
SPG11-203ENST00000535302 NDE1Q9NXR1 346 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 H2AFY2Q9P0M6 372 aaPredicted RBP13.23□□□□□ -0.29
SPG11-203ENST00000535302 HERC5Q9UII4 1024 aaKnown RBP13.23□□□□□ -0.29
SPG11-203ENST00000535302 CRB1P82279 1406 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 GMNCA6NCL1 334 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 ALX1Q15699 326 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 C2CD6Q53TS8 623 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 KCNH4Q9UQ05 1017 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 IGDCC4Q8TDY8 1250 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 C18orf8Q96DM3 657 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 VPS50Q96JG6 964 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 BRD8Q9H0E9 1235 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 PCMTD2Q9NV79 361 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPG11-203ENST00000535302 ZNF555Q8NEP9 628 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 HES6Q96HZ4 224 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 TRIM9Q9C026 710 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 ZFATQ9P243 1243 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 ARHGAP31Q2M1Z3 1444 aa13.23□□□□□ -0.29
SPG11-203ENST00000535302 STXBP3O00186 592 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 ANGPT2O15123 496 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 STK4Q13043 487 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 APEX2Q9UBZ4 518 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 EEF2KO00418 725 aaKnown RBP13.22□□□□□ -0.29
SPG11-203ENST00000535302 CPA2P48052 419 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 DEUP1Q05D60 604 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 TRIM32Q13049 653 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 GLI2P10070 1586 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 CLTCL1P53675 1640 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 KBTBD13C9JR72 458 aa13.22□□□□□ -0.29
SPG11-203ENST00000535302 RPS6KA5O75582 802 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms